RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 GABARAPL3Q9BY60 117 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 TOR3AQ9H497 397 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 RERGLQ9H628 205 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 PLSCR4Q9NRQ2 329 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 SMPD3Q9NY59 655 aaPredicted RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 KLHL21Q9UJP4 597 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 ITPR2Q14571 2701 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 BHLHE40O14503 412 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 MSTNO14793 375 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 TRMUO75648 421 aaKnown RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 SNAP29O95721 258 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 TP53P04637 393 aaPredicted RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 HMGN1P05114 100 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 PGA4P0DJD7 388 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 PGA3P0DJD8 388 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 HIST1H1CP16403 213 aaKnown RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 PAICSP22234 425 aaKnown RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 LGALS3BPQ08380 585 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 PTGES3Q15185 160 aaKnown RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 ARMC4Q5T2S8 1044 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 TSPO2Q5TGU0 170 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 C9orf135Q5VTT2 229 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 TMEM236Q5W0B7 351 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 FBXW9Q5XUX1 488 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 FAM122BQ7Z309 247 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 DMRTC2Q8IXT2 367 aaPredicted RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 TMEM123Q8N131 208 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 LNX2Q8N448 690 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 OR52E2Q8NGJ4 325 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 OR4K13Q8NH42 304 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 ZNF519Q8TB69 540 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 CYGBQ8WWM9 190 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 RNASE6Q93091 150 aaKnown RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 RBP7Q96R05 134 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 ALG12Q9BV10 488 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 RBM24Q9BX46 236 aaKnown RBP11.18□□□□□ -0.62
EFNA1-201ENST00000368406 SLC25A19Q9HC21 320 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 SLC7A10Q9NS82 523 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 IMPAD1Q9NX62 359 aa11.18□□□□□ -0.62
EFNA1-201ENST00000368406 A8MXE2 369 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 CENPBD1B2RD01 187 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 ARPC3O15145 178 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 UPK3AO75631 287 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 ZNF432O94892 652 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 CGAP01215 116 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 EDNRAP25101 427 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 HOXC12P31275 282 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 GIPRP48546 466 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 PTDSS1P48651 473 aaKnown RBP11.17□□□□□ -0.62
EFNA1-201ENST00000368406 CENPAP49450 140 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 ZNF84P51523 738 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 CDC42P60953 191 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 ROR2Q01974 943 aaKnown RBP11.17□□□□□ -0.62
EFNA1-201ENST00000368406 RUNX1T1Q06455 604 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 SNCBQ16143 134 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 SNAPC1Q16533 368 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 DNM1P34Q6PK57 102 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 MEX3BQ6ZN04 569 aaKnown RBP11.17□□□□□ -0.62
EFNA1-201ENST00000368406 Q6ZT83 130 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 C20orf196Q8IYI0 205 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 FNDC8Q8TC99 324 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 NSMAFQ92636 917 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 HDAC2Q92769 488 aaKnown RBP11.17□□□□□ -0.62
EFNA1-201ENST00000368406 LRR1Q96L50 414 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 RDH12Q96NR8 316 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 NMNAT3Q96T66 252 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 LINC00470Q9BZP3 86 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 CRLF2Q9HC73 371 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 TVP23BQ9NYZ1 205 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 GLTPQ9NZD2 209 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 GMPPBQ9Y5P6 360 aa11.17□□□□□ -0.62
EFNA1-201ENST00000368406 A0A1W2PPL8 197 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 CIB4A0PJX0 185 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 PRSS37A4D1T9 235 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 CNOT4O95628 575 aaKnown RBP11.16□□□□□ -0.62
EFNA1-201ENST00000368406 TXNDC12O95881 172 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 QDPRP09417 244 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 IL32P24001 234 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 NTF4P34130 210 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 GUCA1AP43080 201 aaPredicted RBP11.16□□□□□ -0.62
EFNA1-201ENST00000368406 CDK5Q00535 292 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 SORDQ00796 357 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 FMODQ06828 376 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 WDFY1Q8IWB7 410 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 CYB561A3Q8NBI2 242 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 FAM81AQ8TBF8 368 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 NRG4Q8WWG1 115 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 KCNK17Q96T54 332 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 SYT4Q9H2B2 425 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 FN3KQ9H479 309 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 GPR35Q9HC97 309 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 RPRD1BQ9NQG5 326 aaKnown RBP11.16□□□□□ -0.62
EFNA1-201ENST00000368406 CMC2Q9NRP2 79 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 MALT1Q9UDY8 824 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 CACNA1DQ01668 2161 aa11.16□□□□□ -0.62
EFNA1-201ENST00000368406 ANKHD1Q8IWZ3 2542 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms