RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 RAB39AQ14964 217 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 FXNQ16595 210 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 CR1LQ2VPA4 569 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 SLC36A2Q495M3 483 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 LIPNQ5VXI9 398 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 ERICH5Q6P6B1 374 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 WDR88Q6ZMY6 472 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 CCDC80Q76M96 950 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 OR1J2Q8NGS2 313 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 TAMM41Q96BW9 452 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 THOC1Q96FV9 657 aaKnown RBP12.77□□□□□ -0.37
CTSD-202ENST00000367196 SNX18Q96RF0 628 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 SYT3Q9BQG1 590 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 ZNF426Q9BUY5 554 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 LRMDAQ9H2I8 198 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 TMEM38BQ9NVV0 291 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 TAS2R5Q9NYW4 299 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 ZNF224Q9NZL3 707 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 IQCMA0A1B0GVH7 501 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 GMNCA6NCL1 334 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 BBIP1A8MTZ0 92 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 LILRA1O75019 489 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 NPPAP01160 153 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 IGF2P01344 180 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 PGA4P0DJD7 388 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 PGA3P0DJD8 388 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 ACHEP22303 614 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 GPR6P46095 362 aaPredicted RBP12.76□□□□□ -0.37
CTSD-202ENST00000367196 TAS2R41P59536 307 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 MRPS11P82912 194 aaKnown RBP12.76□□□□□ -0.37
CTSD-202ENST00000367196 MELKQ14680 651 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 MAPRE2Q15555 327 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 TBC1D28Q2M2D7 210 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 MMEL1Q495T6 779 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 COQ5Q5HYK3 327 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 RGS7BPQ6MZT1 257 aaPredicted RBP12.76□□□□□ -0.37
CTSD-202ENST00000367196 IL17RELQ6ZVW7 336 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 SLC16A14Q7RTX9 510 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 SKA3Q8IX90 412 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 SLC30A7Q8NEW0 376 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 NOXO1Q8NFA2 376 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 OR8J3Q8NGG0 315 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 SNX33Q8WV41 574 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 RDH5Q92781 318 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 ECSITQ9BQ95 431 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 ZNF416Q9BWM5 594 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 KCNN2Q9H2S1 579 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 RNF121Q9H920 327 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 CDH20Q9HBT6 801 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 DUSP13Q9UII6 198 aa12.76□□□□□ -0.37
CTSD-202ENST00000367196 B4DSR2 109 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 BLOC1S5-TXNDC5H3BN57 136 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 LYPD3O95274 346 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 SNAP29O95721 258 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 MT-ND1P03886 318 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 QDPRP09417 244 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 IFNA8P32881 189 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
CTSD-202ENST00000367196 RAD52P43351 418 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 CDH15P55291 814 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 PLP2Q04941 152 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 SCGB2A2Q13296 93 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 MOGQ16653 247 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 KRTAP24-1Q3LI83 254 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 CARM1Q86X55 608 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 RBM45Q8IUH3 476 aaKnown RBP12.75□□□□□ -0.37
CTSD-202ENST00000367196 OR4D11Q8NGI4 311 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 C1orf159Q96HA4 380 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 BCL2L14Q9BZR8 327 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 SLCO1C1Q9NYB5 712 aa12.75□□□□□ -0.37
CTSD-202ENST00000367196 TMEFF2Q9UIK5 374 aaPredicted RBP12.75□□□□□ -0.37
CTSD-202ENST00000367196 OR5F1O95221 314 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 TFP02787 698 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 MT-ND5P03915 603 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 THY1P04216 161 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 IGFBP1P08833 259 aaPredicted RBP12.74□□□□□ -0.37
CTSD-202ENST00000367196 TROVE2P10155 538 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTSD-202ENST00000367196 SAGP10523 405 aaPredicted RBP12.74□□□□□ -0.37
CTSD-202ENST00000367196 THRBP10828 461 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 ALDH3B1P43353 468 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 DVL1P1P54792 670 aaPredicted RBP12.74□□□□□ -0.37
CTSD-202ENST00000367196 TMEM33P57088 247 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 KLF3P57682 345 aaPredicted RBP12.74□□□□□ -0.37
CTSD-202ENST00000367196 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 ELFN2Q5R3F8 820 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 NANOGP8Q6NSW7 305 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 LRFN4Q6PJG9 635 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 UNQ6126/PRO20091Q6UXV3 157 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 ZNF584Q8IVC4 421 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 RFLNBQ8N5W9 214 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 LRRC17Q8N6Y2 441 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 RBM15BQ8NDT2 890 aaKnown RBP12.74□□□□□ -0.37
CTSD-202ENST00000367196 OR4K5Q8NGD3 323 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 LRRC58Q96CX6 371 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 SH3GL3Q99963 347 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 SOX7Q9BT81 388 aa12.74□□□□□ -0.37
CTSD-202ENST00000367196 NANOGQ9H9S0 305 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms