RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 GJD3Q8N144 294 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 MAFIPQ8WZ33 124 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 ELF4Q99607 663 aaPredicted RBP11.6□□□□□ -0.55
VAMP1-201ENST00000361716 ACKR4Q9NPB9 350 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 SMCO4Q9NRQ5 59 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 MED31Q9Y3C7 131 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TRPM6Q9BX84 2022 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3DA0A087WVF3 549 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3IA0A087WXS9 549 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3EA0A087X179 549 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3KA0A087X1G2 549 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3FA6NER0 549 aaPredicted RBP11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3LB9A6J9 549 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3HP0C7X1 549 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 GALP22466 123 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 S100A2P29034 98 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 GABRA3P34903 492 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 PBX2P40425 430 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 CASRP41180 1078 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 SEC13P55735 322 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 SGCGQ13326 291 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TRMT12Q53H54 448 aaKnown RBP11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3GQ6DHY5 549 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3CQ6IPX1 549 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TBC1D3Q8IZP1 549 aaPredicted RBP11.6□□□□□ -0.55
VAMP1-201ENST00000361716 SHISA5Q8N114 240 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 CHST4Q8NCG5 386 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 OR4S1Q8NGB4 309 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 OR5K2Q8NHB8 316 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 LCN9Q8WX39 176 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 TSSK2Q96PF2 358 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 NMNAT3Q96T66 252 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 RHOFQ9HBH0 211 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 SRA1Q9HD15 236 aaKnown RBP11.6□□□□□ -0.55
VAMP1-201ENST00000361716 UFSP2Q9NUQ7 469 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 ICKQ9UPZ9 632 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 SLC35A3Q9Y2D2 325 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 BRWD1Q9NSI6 2320 aa11.6□□□□□ -0.55
VAMP1-201ENST00000361716 DENND4AQ7Z401 1863 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 PRRT4C9JH25 899 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 MED6O75586 246 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 ZFPL1O95159 310 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 PAPLNO95428 1278 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 DPP4P27487 766 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 DHCR24Q15392 516 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SSX2Q16385 188 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 CDNFQ49AH0 187 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 ACOT7LQ6ZUV0 252 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SLC36A1Q7Z2H8 476 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 OR56A1Q8NGH5 318 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SETD7Q8WTS6 366 aaKnown RBP11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SGK3Q96BR1 496 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 MOAP1Q96BY2 351 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SLC35A4Q96G79 324 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 INSM2Q96T92 566 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SSX3Q99909 188 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 WBP1LQ9NX94 342 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 ST6GALNAC2Q9UJ37 374 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 MED19A0JLT2 244 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-201ENST00000361716 FITM1A5D6W6 292 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 TVP23AA6NH52 213 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SELLP14151 372 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 NDUFA6P56556 154 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 S100A10P60903 97 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SRSF5Q13243 272 aaKnown RBP11.59□□□□□ -0.55
VAMP1-201ENST00000361716 CSRP2Q16527 193 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 MRPL2Q5T653 305 aaKnown RBP11.59□□□□□ -0.55
VAMP1-201ENST00000361716 PGAP1Q75T13 922 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 OVCH1Q7RTY7 1134 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 FAM220AQ7Z4H9 259 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SLC39A11Q8N1S5 342 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 OR2L2Q8NH16 312 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 OR14C36Q8NHC7 312 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 AKR7LQ8NHP1 331 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 KISS1RQ969F8 398 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-201ENST00000361716 ADAD1Q96M93 576 aaKnown RBP11.59□□□□□ -0.55
VAMP1-201ENST00000361716 SYT4Q9H2B2 425 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 FN3KRPQ9HA64 309 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 TMEM27Q9HBJ8 222 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 BARX1Q9HBU1 254 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-201ENST00000361716 CLDND1Q9NY35 253 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 UPB1Q9UBR1 384 aa11.59□□□□□ -0.55
VAMP1-201ENST00000361716 CXorf65A6NEN9 183 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 URADA6NGE7 173 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 CSF1P09603 554 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 TPT1P13693 172 aaKnown RBP11.58□□□□□ -0.55
VAMP1-201ENST00000361716 ZNF44P15621 663 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 MUC1P15941 1255 aaPredicted RBP11.58□□□□□ -0.55
VAMP1-201ENST00000361716 ABOP16442 354 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 ACTC1P68032 377 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 ACTA1P68133 377 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 IL13RA1P78552 427 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 LCTLQ6UWM7 567 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 WDR88Q6ZMY6 472 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 ZNF227Q86WZ6 799 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 KCNRGQ8N5I3 272 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 LINC01555Q8NAE3 123 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 HAVCR1Q96D42 359 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 Q96M85 177 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 SMIM3Q9BZL3 60 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms