RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 MIB2Q96AX9 1013 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 RASD2Q96D21 266 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 OCSTAMPQ9BR26 566 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 OR14J1Q9UGF5 321 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 RAB22AQ9UL26 194 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 TIMM10BQ9Y5J6 103 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 SULT1B1O43704 296 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 CSO75390 466 aaKnown RBP12.34□□□□□ -0.43
LDB3-202ENST00000361373 JUNBP17275 347 aaPredicted RBP12.34□□□□□ -0.43
LDB3-202ENST00000361373 CD53P19397 219 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 ZNF93P35789 620 aaPredicted RBP12.34□□□□□ -0.43
LDB3-202ENST00000361373 SFXN4Q6P4A7 337 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 WDR5BQ86VZ2 330 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 ACBD4Q8NC06 268 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 OR4N2Q8NGD1 307 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 MSI2Q96DH6 328 aaKnown RBP12.34□□□□□ -0.43
LDB3-202ENST00000361373 BOD1Q96IK1 185 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 TRAPPC2LQ9UL33 140 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 PCDHGA1Q9Y5H4 931 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 STMND1H3BQB6 276 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 F10P00742 488 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 ARR3P36575 388 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 ZNF133P52736 654 aaPredicted RBP12.34□□□□□ -0.43
LDB3-202ENST00000361373 ZNF616Q08AN1 781 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 ZNF585AQ6P3V2 769 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 GAB3Q8WWW8 586 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 OR2M2Q96R28 347 aa12.34□□□□□ -0.43
LDB3-202ENST00000361373 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
LDB3-202ENST00000361373 RP1L1Q8IWN7 2480 aaPredicted RBP12.34□□□□□ -0.43
LDB3-202ENST00000361373 HLA-DMAP28067 261 aa12.33□□□□□ -0.43
LDB3-202ENST00000361373 HNRNPFP52597 415 aaKnown RBP12.33□□□□□ -0.43
LDB3-202ENST00000361373 RPS25P62851 125 aaKnown RBP12.33□□□□□ -0.43
LDB3-202ENST00000361373 FZD2Q14332 565 aa12.33□□□□□ -0.43
LDB3-202ENST00000361373 YRDCQ86U90 279 aaKnown RBP12.33□□□□□ -0.43
LDB3-202ENST00000361373 LINC00346Q8IVM7 164 aa12.33□□□□□ -0.43
LDB3-202ENST00000361373 OR56B4Q8NH76 319 aa12.33□□□□□ -0.43
LDB3-202ENST00000361373 OXGR1Q96P68 337 aa12.33□□□□□ -0.43
LDB3-202ENST00000361373 EIF5A2Q9GZV4 153 aaKnown RBP12.33□□□□□ -0.43
LDB3-202ENST00000361373 RGCCQ9H4X1 137 aa12.33□□□□□ -0.43
LDB3-202ENST00000361373 PLCXD1Q9NUJ7 323 aa12.33□□□□□ -0.43
LDB3-202ENST00000361373 COA3Q9Y2R0 106 aaPredicted RBP12.33□□□□□ -0.43
LDB3-202ENST00000361373 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.43
LDB3-202ENST00000361373 NKX6-3A6NJ46 265 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 TOX3O15405 576 aaPredicted RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 TFAP2AP05549 437 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 NAGAP17050 411 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 RNF4P78317 190 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 CLPPQ16740 277 aaPredicted RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 LINC00299Q6ZSB3 139 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 C1orf210Q8IVY1 113 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 CNRIP1Q96F85 164 aaPredicted RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 NKX3-1Q99801 234 aaPredicted RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 SULT4A1Q9BR01 284 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 COL5A3P25940 1745 aaPredicted RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 IGHV1OR15-9A0A0B4J2B8 117 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 E9PI62 339 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 PIP5K1CO60331 668 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 RGS11O94810 467 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 SBK3P0C264 359 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 ECI1P42126 302 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 NXPH1P58417 271 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 PPIAP62937 165 aaKnown RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 OR1N1Q8NGS0 311 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 PFN4Q8NHR9 129 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 RPP25Q9BUL9 199 aaKnown RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 GABARAPL3Q9BY60 117 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 PTTG3PQ9NZH4 202 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 A0A1W2PQ09 198 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 P2RY10O00398 339 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 PIGAP37287 484 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 RBMS2Q15434 407 aaKnown RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 SYT14P1Q58G82 188 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 MEX3BQ6ZN04 569 aaKnown RBP12.33□□□□□ -0.44
LDB3-202ENST00000361373 OR6V1Q8N148 313 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 DCUN1D4Q92564 292 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 C8orf44Q96CB5 159 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 KIF25Q9UIL4 384 aa12.33□□□□□ -0.44
LDB3-202ENST00000361373 SERTM1A2A2V5 107 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 C2orf72A6NCS6 295 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 FCMRO60667 390 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 ICOSLGO75144 302 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 NXPH2O95156 264 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 ETHE1O95571 254 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 ATP1B1P05026 303 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 NFYAP23511 347 aaPredicted RBP12.32□□□□□ -0.44
LDB3-202ENST00000361373 BLVRBP30043 206 aaPredicted RBP12.32□□□□□ -0.44
LDB3-202ENST00000361373 GALEQ14376 348 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 RBM45Q8IUH3 476 aaKnown RBP12.32□□□□□ -0.44
LDB3-202ENST00000361373 ADGRF3Q8IZF5 1079 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 WDSUB1Q8N9V3 476 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 WDR34Q96EX3 536 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 OR2A14Q96R47 310 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 DECR2Q9NUI1 292 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 TNFRSF10AO00220 468 aa12.32□□□□□ -0.44
LDB3-202ENST00000361373 PTBP1P26599 531 aaKnown RBP eCLIP12.32□□□□□ -0.44
LDB3-202ENST00000361373 DIO1P49895 249 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms