RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ACBD4Q8NC06 268 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 Q96M85 177 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 CIB1Q99828 191 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 TSSK6Q9BXA6 273 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 PLA2G12AQ9BZM1 189 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 CRLF2Q9HC73 371 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 OBP2BQ9NPH6 170 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 IER3IP1Q9Y5U9 82 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 MAGED1Q9Y5V3 778 aaPredicted RBP14.09□□□□□ -0.15
FDPS-201ENST00000356657 HECTD1Q9ULT8 2610 aa14.09□□□□□ -0.15
FDPS-201ENST00000356657 PRSS44E7EML9 344 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 UPK3AO75631 287 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 GOSR1O95249 250 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 SOX14O95416 240 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 PPP1R3DO95685 299 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 CLDN1O95832 211 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 IFNGP01579 166 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 IGHV3-9P01782 118 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 IGHV1-2P23083 117 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 HOXC12P31275 282 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 GRK5P34947 590 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 ZNF84P51523 738 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 CD47Q08722 323 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 RIPK1Q13546 671 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 MESTQ5EB52 335 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 CLEC12AQ5QGZ9 265 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 CARD17Q5XLA6 110 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 JAZF1Q86VZ6 243 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 CXorf67Q86X51 503 aaPredicted RBP14.08□□□□□ -0.16
FDPS-201ENST00000356657 PACRGLQ8N7B6 248 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 RDH12Q96NR8 316 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 SPOCK3Q9BQ16 436 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 SLC25A19Q9HC21 320 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 GPR35Q9HC97 309 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 NPDC1Q9NQX5 325 aaPredicted RBP14.08□□□□□ -0.16
FDPS-201ENST00000356657 VSX1Q9NZR4 365 aaPredicted RBP14.08□□□□□ -0.16
FDPS-201ENST00000356657 IL20RAQ9UHF4 553 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 KLHL21Q9UJP4 597 aa14.08□□□□□ -0.16
FDPS-201ENST00000356657 UTP20O75691 2785 aaKnown RBP14.08□□□□□ -0.16
FDPS-201ENST00000356657 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 CIB4A0PJX0 185 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 M0R3G1 203 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 EI24O14681 340 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 CASQ2O14958 399 aaPredicted RBP14.07□□□□□ -0.16
FDPS-201ENST00000356657 ARHGEF9O43307 516 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 HMGN1P05114 100 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 ITGA5P08648 1049 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 CRABP1P29762 137 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 GIPRP48546 466 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 CRISP1P54107 249 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 MYBPC1Q00872 1141 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 FAM27E3Q08E93 113 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 PGGHGQ32M88 737 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 TIMM23BQ5SRD1 257 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 ANKRD16Q6P6B7 361 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 ZBTB49Q6ZSB9 765 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
FDPS-201ENST00000356657 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.07□□□□□ -0.16
FDPS-201ENST00000356657 CBR4Q8N4T8 237 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 OR8D4Q8NGM9 314 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 HDAC2Q92769 488 aaKnown RBP14.07□□□□□ -0.16
FDPS-201ENST00000356657 NMD3Q96D46 503 aaKnown RBP14.07□□□□□ -0.16
FDPS-201ENST00000356657 MUS81Q96NY9 551 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 GABARAPL3Q9BY60 117 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 VCXQ9H320 206 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 RNPEPL1Q9HAU8 725 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 CMC2Q9NRP2 79 aa14.07□□□□□ -0.16
FDPS-201ENST00000356657 TMEFF2Q9UIK5 374 aaPredicted RBP14.07□□□□□ -0.16
FDPS-201ENST00000356657 SLC22A23A1A5C7 686 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 TUBAL3A6NHL2 446 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 RIIAD1A6NNX1 92 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 SOCS2O14508 198 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 DHHO43323 396 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 RENP00797 406 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 QDPRP09417 244 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 ZNF3P17036 446 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 NPR2P20594 1047 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 GUCA1AP43080 201 aaPredicted RBP14.06□□□□□ -0.16
FDPS-201ENST00000356657 CDK5Q00535 292 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 RUNX1T1Q06455 604 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 TRIP10Q15642 601 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 CEACAM16Q2WEN9 425 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 DPPA2Q7Z7J5 298 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 DMRTC2Q8IXT2 367 aaPredicted RBP14.06□□□□□ -0.16
FDPS-201ENST00000356657 HSD17B8Q92506 261 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 MCHR2Q969V1 340 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 RASD2Q96D21 266 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 DACH2Q96NX9 599 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 SLC38A2Q96QD8 506 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 SETXQ7Z333 2677 aaKnown RBP14.06□□□□□ -0.16
FDPS-201ENST00000356657 OR5H1A6NKK0 313 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 LYZL6O75951 148 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 FARS2O95363 451 aaKnown RBP14.06□□□□□ -0.16
FDPS-201ENST00000356657 HIST1H1CP16403 213 aaKnown RBP14.06□□□□□ -0.16
FDPS-201ENST00000356657 PAICSP22234 425 aaKnown RBP14.06□□□□□ -0.16
FDPS-201ENST00000356657 POU1F1P28069 291 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 CCKARP32238 428 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 CENPAP49450 140 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 GABRA6Q16445 453 aa14.06□□□□□ -0.16
FDPS-201ENST00000356657 HIST2H2BCQ6DN03 193 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms