RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 RCBTB1Q8NDN9 531 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 CASTOR1Q8WTX7 329 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF524Q96C55 264 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 VRK1Q99986 396 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF426Q9BUY5 554 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 SYT4Q9H2B2 425 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF275Q9NSD4 429 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-203ENST00000356147 KCNG2Q9UJ96 466 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 PILRAQ9UKJ1 303 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 DCDC2BA2VCK2 349 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 DISC1C4P0D8 188 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 NDUFA2O43678 99 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 AKAIN1P0CW23 69 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 RAB3AP20336 220 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 ATP1B3P54709 279 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 SLC22A6Q4U2R8 563 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OR2W3Q7Z3T1 314 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 PARGQ86W56 976 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 NAXDQ8IW45 347 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OR9A4Q8NGU2 314 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OR6K3Q8NGY3 331 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OR6N1Q8NGY5 312 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OR2G2Q8NGZ5 317 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 CYYR1Q96J86 154 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 MYADMQ96S97 322 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 TSNAXQ99598 290 aaKnown RBP9.2□□□□□ -0.94
PTPRA-203ENST00000356147 TRIM2Q9C040 744 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 MED9Q9NWA0 146 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 MLXQ9UH92 298 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 TBX21Q9UL17 535 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 RTTNQ86VV8 2226 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 TMEM82A0PJX8 343 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 C11orf98E9PRG8 122 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 KCNJ13O60928 360 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 RAB3DO95716 219 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 AVPR2P30518 371 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 CAPZA1P52907 286 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 ILF3Q12906 894 aaKnown RBP eCLIP9.2□□□□□ -0.947e-10■■■□□ 18.6
PTPRA-203ENST00000356147 GGTLC2Q14390 218 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 PDGFRLQ15198 375 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 CBLN3Q6UW01 205 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 DPY19L2P2Q6ZN68 376 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 KRT77Q7Z794 578 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 SLAIN1Q8ND83 568 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OR1E3Q8WZA6 343 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 APOOQ9BUR5 198 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 SLC17A9Q9BYT1 436 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 GLS2Q9UI32 602 aa9.2□□□□□ -0.94
PTPRA-203ENST00000356147 OR4C45A6NMZ5 311 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 SOX1O00570 391 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 CYR61O00622 381 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 LDOC1O95751 146 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 CALCRP30988 508 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 TSFMP43897 325 aaKnown RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 MOGAT2Q3SYC2 334 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 AKIRIN2Q53H80 203 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF542PQ5EBM4 170 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF684Q5T5D7 378 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 KCTD9Q7L273 389 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 PUSL1Q8N0Z8 303 aaKnown RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 GABRG1Q8N1C3 465 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 RAB7BQ96AH8 199 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 FAM3DQ96BQ1 224 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 CPNE2Q96FN4 548 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 PELOQ9BRX2 385 aaKnown RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 TIMM29Q9BSF4 260 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 PCDHB10Q9UN67 800 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 COLEC10Q9Y6Z7 277 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 KANTRA0A1W2PQU2 76 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF98A6NK75 572 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 RFPL4AA6NLU0 287 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 EEF1E1-BLOC1S5C9J1V9 151 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 RFPL4AL1F8VTS6 287 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 KAT7O95251 611 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 BDKRB2P30411 391 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 PBX2P40425 430 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 MNDAP41218 407 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 MRPS10P82664 201 aaKnown RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 ENPP2Q13822 863 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 WDR38Q5JTN6 314 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 NPSR1Q6W5P4 371 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 RTN4RL2Q86UN3 420 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 EID2Q8N6I1 236 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 OR51A2Q8NGJ7 313 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 SP7Q8TDD2 431 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 CMBLQ96DG6 245 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 C12orf57Q99622 126 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 UTP23Q9BRU9 249 aaKnown RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 BARX1Q9HBU1 254 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-203ENST00000356147 C14orf105Q9NVL8 296 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 RASL12Q9NYN1 266 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 PRELID3BQ9Y3B1 194 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF175Q9Y473 711 aa9.19□□□□□ -0.94
PTPRA-203ENST00000356147 PRSS38A1L453 326 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 TMEM235A6NFC5 223 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 F5H0A9 414 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 FADS1O60427 444 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 WNT11O96014 354 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 HLA-AP01891 365 aaKnown RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 CSF1P09603 554 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms