RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 LRRC37AA6NMS7 1700 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 FRG2CA6NGY1 282 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 HNF1AP20823 631 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 PPP5CP53041 499 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 IL13RA1P78552 427 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 CDK5R2Q13319 367 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 FAM109AQ8N4B1 249 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 SIMC1Q8NDZ2 872 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 RAB3CQ96E17 227 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 LOXL4Q96JB6 756 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 SIDT1Q9NXL6 827 aaKnown RBP10.36□□□□□ -0.75
FN1-204ENST00000356005 ARID1AO14497 2285 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 ACACAQ13085 2346 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 A0A1W2PQL4 384 aaPredicted RBP10.36□□□□□ -0.75
FN1-204ENST00000356005 C17orf112F2Z3M2 114 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 AADACL3Q5VUY0 350 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 LRRC28Q86X40 367 aaPredicted RBP10.36□□□□□ -0.75
FN1-204ENST00000356005 GNB4Q9HAV0 340 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 GCM1Q9NP62 436 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 SCN5AQ14524 2016 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 NCOR1O75376 2440 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 PRAF2O60831 178 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 SRP14P37108 136 aaKnown RBP10.36□□□□□ -0.75
FN1-204ENST00000356005 LCN6P62502 163 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 RPL11P62913 178 aaKnown RBP10.36□□□□□ -0.75
FN1-204ENST00000356005 MAELQ96JY0 434 aaKnown RBP10.36□□□□□ -0.75
FN1-204ENST00000356005 PDFQ9HBH1 243 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 BABAM2Q9NXR7 383 aa10.36□□□□□ -0.75
FN1-204ENST00000356005 CEP250Q9BV73 2442 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 OR6C6A6NF89 314 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 C21orf140B9A014 251 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 K7EQS6 105 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 C21orf33P30042 268 aaPredicted RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 CAMLGP49069 296 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 SRP9P49458 86 aaKnown RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 PIGFQ07326 219 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 GAB1Q13480 694 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 LEXMQ3ZCV2 418 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 DHRS13Q6UX07 377 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 LSRQ86X29 649 aaPredicted RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 VRK3Q8IV63 474 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 SLC39A7Q92504 469 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 DCUN1D4Q92564 292 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 OXGR1Q96P68 337 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 PIGLQ9Y2B2 252 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 A0A1B0GWA3 101 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 PTGS2P35354 604 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 RFLNAQ6ZTI6 216 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 TMEM151AQ8N4L1 468 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 LRFN5Q96NI6 719 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 JAM3Q9BX67 310 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 TMA7Q9Y2S6 64 aaKnown RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 YBX2Q9Y2T7 364 aaKnown RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 ETV7Q9Y603 341 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 NARSO43776 548 aaKnown RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 GABRA5P31644 462 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 ZNF616Q08AN1 781 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 ARL16Q0P5N6 197 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 SQSTM1Q13501 440 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 HES3Q5TGS1 186 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 SEMA6DQ8NFY4 1073 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 SYNPO2LQ9H987 977 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 KCNJ16Q9NPI9 418 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 HIF1ANQ9NWT6 349 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 B3GALT5Q9Y2C3 310 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 GFYI3L273 518 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 M0QZ24 198 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 ST8SIA5O15466 376 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 OR2J2O76002 312 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 CLIC3O95833 236 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 GYPBP06028 91 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 AQP2P41181 271 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 SMRP1Q8NCR6 262 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 MALSU1Q96EH3 234 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 ATF6BQ99941 703 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 CACNG6Q9BXT2 260 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 RAB1BQ9H0U4 201 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 SLC22A11Q9NSA0 550 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 C19orf53Q9UNZ5 99 aaPredicted RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 SH2D7A6NKC9 451 aaPredicted RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 CTXN2P0C2S0 81 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 TNFRSF1AP19438 455 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 RPS18P62269 152 aaKnown RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 PPP2CBP62714 309 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 PPP2CAP67775 309 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 LTBQ06643 244 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 ILKQ13418 452 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 LTC4SQ16873 150 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 FAM74A1Q5RGS3 127 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 OR2L13Q8N349 312 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 ABHD6Q9BV23 337 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 SGPP1Q9BX95 441 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 WWTR1Q9GZV5 400 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 C1orf123Q9NWV4 160 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 TSPAN11A1L157 253 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 HSPB6O14558 160 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 GABRA1P14867 456 aa10.35□□□□□ -0.75
FN1-204ENST00000356005 RPL27P61353 136 aaKnown RBP10.35□□□□□ -0.75
FN1-204ENST00000356005 MFGE8Q08431 387 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms