RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SIRT3Q9NTG7 399 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-202ENST00000355815 A0A087WZY1 265 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 A0A0D9SG52 128 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 ETV6P41212 452 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 CLDN6P56747 220 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 PPP1CAP62136 330 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 PDE7AQ13946 482 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF836Q6ZNA1 936 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 HPSE2Q8WWQ2 592 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 FAM71F1Q96KD3 344 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 PRDM7Q9NQW5 492 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 SLC22A11Q9NSA0 550 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 COPS7AQ9UBW8 275 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 MRPS2Q9Y399 296 aaKnown RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 EP300Q09472 2414 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 DIDO1Q9BTC0 2240 aaKnown RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 A0A1B0GWA3 101 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 DNAJB6O75190 326 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 NQO2P16083 231 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 SNRPEP62304 92 aaKnown RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 MAPK14Q16539 360 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 SLC25A35Q3KQZ1 300 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 RPL13AP3Q6NVV1 102 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 DPPA2Q7Z7J5 298 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 CDC6Q99741 560 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 IER2Q9BTL4 223 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 FTSJ1Q9UET6 329 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 CD207Q9UJ71 328 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 FBXL4Q9UKA2 621 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 DAPP1Q9UN19 280 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 CAMK2AQ9UQM7 478 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 TMEM14AQ9Y6G1 99 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF726A6NNF4 738 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 CRYBA2P53672 197 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 KIR2DS3Q14952 304 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 SLC22A6Q4U2R8 563 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 C4orf17Q53FE4 359 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 NKAIN2Q5VXU1 208 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 ETFBKMTQ8IXQ9 262 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 OR6N1Q8NGY5 312 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 OR2T4Q8NH00 348 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 TSSK2Q96PF2 358 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 DERL3Q96Q80 235 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 MEPEQ9NQ76 525 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 TESQ9UGI8 421 aaKnown RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 CTSVO60911 334 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 TNK1Q13470 666 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 EXOSC6Q5RKV6 272 aaKnown RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 STEAP1BQ6NZ63 245 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 SCGB1C1Q8TD33 95 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 WDR77Q9BQA1 342 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-202ENST00000355815 UFSP2Q9NUQ7 469 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 ADAM29Q9UKF5 820 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 NEUROG3Q9Y4Z2 214 aa12.91□□□□□ -0.34
SREBF1-202ENST00000355815 BTG2P78543 158 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 CYCSP99999 105 aaKnown RBP12.9□□□□□ -0.34
SREBF1-202ENST00000355815 CORO6Q6QEF8 472 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 UBE3DQ7Z6J8 389 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 MRPL41Q8IXM3 137 aaKnown RBP12.9□□□□□ -0.34
SREBF1-202ENST00000355815 SLC35A3Q9Y2D2 325 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 PRELID3BQ9Y3B1 194 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 CYTIPO60759 359 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 KCNJ13O60928 360 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 RAB4BP61018 213 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 UBE2KP61086 200 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 TRA2BP62995 288 aaKnown RBP12.9□□□□□ -0.34
SREBF1-202ENST00000355815 FOXK2Q01167 660 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 SNTB1Q13884 538 aaKnown RBP12.9□□□□□ -0.34
SREBF1-202ENST00000355815 OR4C15Q8NGM1 316 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 FAM213BQ8TBF2 198 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 GLYATL2Q8WU03 294 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 RBP7Q96R05 134 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 SMCO4Q9NRQ5 59 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 CACNA1GO43497 2377 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 C17orf105B2RV13 164 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 ST6GAL1P15907 406 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 SNRPGP62308 76 aaKnown RBP12.9□□□□□ -0.34
SREBF1-202ENST00000355815 PLEKHN1Q494U1 663 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF550Q7Z398 422 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 PLPP7Q8NBV4 271 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 GOT1L1Q8NHS2 421 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-202ENST00000355815 CXorf58Q96LI9 332 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 KIR3DX1Q9H7L2 352 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 PDE7BQ9NP56 450 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF175Q9Y473 711 aa12.9□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF593O00488 134 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 CRTAPO75718 401 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 MYF5P13349 255 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 PCBP3P57721 371 aaKnown RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 KCNAB1Q14722 419 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 CLLU1Q5K131 121 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 C3orf33Q6P1S2 294 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 DPY19L4Q7Z388 723 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 CAMKMTQ7Z624 323 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 RDH10Q8IZV5 341 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 FAM26EQ8N5C1 309 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 KCNRGQ8N5I3 272 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 SPOCK3Q9BQ16 436 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 C20orf141Q9NUB4 165 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms