RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 NEURL1O76050 574 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 UCHL1P09936 223 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 CEACAM1P13688 526 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 GPR85P60893 370 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 LCN6P62502 163 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 DBPQ10586 325 aaPredicted RBP15.39■□□□□ 0.05
VPS13B-201ENST00000355155 THEM4Q5T1C6 240 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 LYPD4Q6UWN0 246 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 WDFY1Q8IWB7 410 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 SMAP2Q8WU79 429 aaPredicted RBP15.39■□□□□ 0.05
VPS13B-201ENST00000355155 KCTD12Q96CX2 325 aaKnown RBP15.39■□□□□ 0.05
VPS13B-201ENST00000355155 OR8B4Q96RC9 309 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 ABI3Q9P2A4 366 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 KCNG2Q9UJ96 466 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 SHISA3A0PJX4 238 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 KHDRBS3O75525 346 aaKnown RBP15.39■□□□□ 0.05
VPS13B-201ENST00000355155 PGA4P0DJD7 388 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 PGA3P0DJD8 388 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 PSKH1P11801 424 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 S100A5P33763 92 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 GDI2P50395 445 aaKnown RBP15.39■□□□□ 0.05
VPS13B-201ENST00000355155 CCR9P51686 369 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 FOXK1P85037 733 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 YIF1BQ5BJH7 314 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 FOXL2NBQ6ZUU3 175 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 TMPRSS7Q7RTY8 843 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 UEVLDQ8IX04 471 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 NEIL3Q8TAT5 605 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 ADGRG7Q96K78 797 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 GNRHR2Q96P88 292 aa15.39■□□□□ 0.05
VPS13B-201ENST00000355155 SF3B5Q9BWJ5 86 aaKnown RBP15.39■□□□□ 0.05
VPS13B-201ENST00000355155 MRPS18BQ9Y676 258 aaKnown RBP15.39■□□□□ 0.05
VPS13B-201ENST00000355155 H3BML4 177 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 PTBP1P26599 531 aaKnown RBP eCLIP15.38■□□□□ 0.058e-7■■■□□ 15.6
VPS13B-201ENST00000355155 OR2B6P58173 313 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 CSNK2A1P68400 391 aaPredicted RBP15.38■□□□□ 0.05
VPS13B-201ENST00000355155 GLO1Q04760 184 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 C19orf57Q0VDD7 668 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 SLC25A47Q6Q0C1 308 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 DEGS2Q6QHC5 323 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 ACOT12Q8WYK0 555 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 GHSRQ92847 366 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 OR5B2Q96R09 309 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 SH3GL3Q99963 347 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 FAM173AQ9BQD7 235 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 HDHD5Q9BXW7 423 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 SNTG1Q9NSN8 517 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 DEPPQ9NTK1 212 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 ACOXLQ9NUZ1 547 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 QPCTLQ9NXS2 382 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 IL17BQ9UHF5 180 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 VCANP13611 3396 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 LOC110117498-PIK3R3F6TDL0 507 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 SLC16A7O60669 478 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 PLGP00747 810 aaPredicted RBP15.38■□□□□ 0.05
VPS13B-201ENST00000355155 MELKQ14680 651 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 SYT14Q8NB59 555 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 MINDY2Q8NBR6 621 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 NOXO1Q8NFA2 376 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 CHPT1Q8WUD6 406 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 KIAA1143Q96AT1 154 aaPredicted RBP15.38■□□□□ 0.05
VPS13B-201ENST00000355155 SLC25A44Q96H78 314 aaPredicted RBP15.38■□□□□ 0.05
VPS13B-201ENST00000355155 SOSTQ9BQB4 213 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 TTYH2Q9BSA4 534 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 NAA11Q9BSU3 229 aaPredicted RBP15.38■□□□□ 0.05
VPS13B-201ENST00000355155 ZFP64Q9NPA5 681 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 LAMP5Q9UJQ1 280 aa15.38■□□□□ 0.05
VPS13B-201ENST00000355155 TRBV5-5A0A0J9YX44 114 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 ISPDA4D126 451 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 ZNF432O94892 652 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 HPNP05981 417 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 CD96P40200 585 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 POU3F1Q03052 451 aaPredicted RBP15.37■□□□□ 0.05
VPS13B-201ENST00000355155 TMEM176BQ3YBM2 270 aaPredicted RBP15.37■□□□□ 0.05
VPS13B-201ENST00000355155 ARL9Q6T311 187 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 Q6ZNX1 250 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 MDS2Q8NDY4 140 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 C5orf34Q96MH7 638 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS13B-201ENST00000355155 STMN3Q9NZ72 180 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 GNG8Q9UK08 70 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 A0A0G2JMM0 328 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 A0A1W2PPB8 328 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 A0A1W2PRS3 328 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 KIR3DP1A8MWS1 328 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 SRSF10O75494 262 aaKnown RBP15.37■□□□□ 0.05
VPS13B-201ENST00000355155 CLEC2LP0C7M8 214 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 LIPCP11150 499 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 CASRP41180 1078 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 ALKBH1Q13686 389 aaKnown RBP15.37■□□□□ 0.05
VPS13B-201ENST00000355155 ZNF181Q2M3W8 571 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 SLC18B1Q6NT16 456 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 RHOUQ7L0Q8 258 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 TMEM54Q969K7 222 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 BOKQ9UMX3 212 aaPredicted RBP15.37■□□□□ 0.05
VPS13B-201ENST00000355155 ZNF281Q9Y2X9 895 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 CMAHPQ9Y471 501 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 NCKAP5O14513 1909 aa15.37■□□□□ 0.05
VPS13B-201ENST00000355155 A0A0G2JK05 382 aa15.36■□□□□ 0.05
VPS13B-201ENST00000355155 SULT2B1O00204 365 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms