RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SLC16A11Q8NCK7 471 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 RP9Q8TA86 221 aaKnown RBP9.75□□□□□ -0.85
RTN3-204ENST00000354497 FAM216AQ8WUB2 273 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 DNAJA4Q8WW22 397 aaPredicted RBP9.75□□□□□ -0.85
RTN3-204ENST00000354497 GTF2H4Q92759 462 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 DNAJA3Q96EY1 480 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 C16orf58Q96GQ5 468 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 APOL4Q9BPW4 351 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 RBM4Q9BWF3 364 aaKnown RBP9.75□□□□□ -0.85
RTN3-204ENST00000354497 SLC19A3Q9BZV2 496 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 QRSL1Q9H0R6 528 aaKnown RBP9.75□□□□□ -0.85
RTN3-204ENST00000354497 RAB1BQ9H0U4 201 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 MMP27Q9H306 513 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 ING3Q9NXR8 418 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 UPB1Q9UBR1 384 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 PCDHB10Q9UN67 800 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 USP22Q9UPT9 525 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 AMDHD2Q9Y303 409 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 A0A0G2JK05 382 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 TMEM238LA0A1B0GVL6 79 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 A0A1B0GWJ7 208 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 A0A1W2PPM1 405 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 TCRBV3S1A0A5B6 114 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 SULT2B1O00204 365 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 MRPL33O75394 65 aaKnown RBP9.74□□□□□ -0.85
RTN3-204ENST00000354497 CLN5O75503 358 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 ERCC1P07992 297 aaPredicted RBP9.74□□□□□ -0.85
RTN3-204ENST00000354497 ITGA5P08648 1049 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 IFNGR1P15260 489 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 MATN1P21941 496 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 SERPINF1P36955 418 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 DIO1P49895 249 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 AQP5P55064 265 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 MERTKQ12866 999 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 QPRTQ15274 297 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 ZSWIM7Q19AV6 140 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 SPATS1Q496A3 300 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 MIDNQ504T8 468 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 AWAT1Q58HT5 328 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 TEX30Q5JUR7 227 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 C3orf33Q6P1S2 294 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 CASP12Q6UXS9 341 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 ZNF786Q8N393 782 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 SVOPLQ8N434 492 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 DTX3Q8N9I9 347 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 GPR119Q8TDV5 335 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 ASB9Q96DX5 294 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 MRGPRX4Q96LA9 322 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 MUS81Q96NY9 551 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 MS4A4EQ96PG1 132 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 KCNA7Q96RP8 456 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 SLC17A5Q9NRA2 495 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 KCNK7Q9Y2U2 307 aa9.74□□□□□ -0.85
RTN3-204ENST00000354497 DBX1A6NMT0 343 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 B9A039 149 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 POC1B-GALNT4F8VUJ3 575 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 SSX5O60225 188 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 GMDSO60547 372 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 LILRA1O75019 489 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 UGT2B17O75795 530 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 CYP7B1O75881 506 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 TACSTD2P09758 323 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 OR4A8P0C604 315 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 TFPIP10646 304 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 PSKH1P11801 424 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 BGNP21810 368 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 LCN1P31025 176 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 IDH3GP51553 393 aaPredicted RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 GBX2P52951 348 aaPredicted RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 UGT2B15P54855 530 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 SUMO3P55854 103 aaPredicted RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 CSNK2A1P68400 391 aaPredicted RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 BST1Q10588 318 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ABLIM2Q6H8Q1 611 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ELP2Q6IA86 826 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 TMEM65Q6PI78 240 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 SLC16A12Q6ZSM3 486 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 TSPYL5Q86VY4 417 aaPredicted RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 DCAKDQ8WVC6 231 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 CDS1Q92903 461 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 SNAPC3Q92966 411 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ZHX1-C8orf76Q96EF9 292 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 MRPL57Q9BQC6 102 aaKnown RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 CCDC32Q9BV29 185 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ADI1Q9BV57 179 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 SERINC1Q9NRX5 453 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 DDX28Q9NUL7 540 aaKnown RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 MKLN1Q9UL63 735 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ICAM5Q9UMF0 924 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 TRAPPC4Q9Y296 219 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 PCDHB14Q9Y5E9 798 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 MGAM2Q2M2H8 2515 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 PNMA8CA0A1B0GUJ8 204 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 TMPRSS2O15393 492 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 WNT11O96014 354 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 PGCP20142 388 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 VAMP1P23763 118 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 MAP3K8P41279 467 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 SLC1A3P43003 542 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ASMTP46597 345 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms