RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 HS3ST3A1Q9Y663 406 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 PRKNO60260 465 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-202ENST00000352393 RPS27P42677 84 aaKnown RBP22.22■■□□□ 1.15
CPNE1-202ENST00000352393 HHEXQ03014 270 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 TMUB2Q71RG4 321 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 PHOSPHO1Q8TCT1 267 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 CXorf58Q96LI9 332 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 LINC00052Q96N35 136 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 INTS14Q96SY0 518 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 C1QTNF6Q9BXI9 259 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 ULBP3Q9BZM4 244 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 PRODH2Q9UF12 536 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 TMEM14AQ9Y6G1 99 aa22.22■■□□□ 1.15
CPNE1-202ENST00000352393 ARPC5O15511 151 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 RP2O75695 350 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 SIX6O95475 246 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 RENP00797 406 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 HOXD4P09016 255 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-202ENST00000352393 ZNF35P13682 527 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 CALCRP30988 508 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 GUCA2AQ02747 115 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 ZNF542PQ5EBM4 170 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 NKAIN2Q5VXU1 208 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 OR2AK2Q8NG84 335 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 OR51D1Q8NGF3 324 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 DCBLD2Q96PD2 775 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 AMELYQ99218 206 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 PPA2Q9H2U2 334 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 NSA2O95478 260 aaKnown RBP22.21■■□□□ 1.15
CPNE1-202ENST00000352393 RABIFP47224 123 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 EIF2B5Q13144 721 aaKnown RBP22.21■■□□□ 1.15
CPNE1-202ENST00000352393 WDR38Q5JTN6 314 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 PXDC1Q5TGL8 231 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 OR7E24Q6IFN5 339 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 NUP54Q7Z3B4 507 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 TAF8Q7Z7C8 310 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 SCARB1Q8WTV0 552 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 CDCA3Q99618 268 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-202ENST00000352393 SYT4Q9H2B2 425 aa22.21■■□□□ 1.15
CPNE1-202ENST00000352393 F5H5P2 479 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 PHYHO14832 338 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 BET1O15155 118 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 RLN1P04808 185 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 PPP3CBP16298 524 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 POU3F4P49335 361 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 MAP2K6P52564 334 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 FDX2Q6P4F2 183 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 LRRC69Q6ZNQ3 347 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 BPHLQ86WA6 291 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-202ENST00000352393 NAXDQ8IW45 347 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 MUC20Q8N307 709 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-202ENST00000352393 KLHDC3Q9BQ90 382 aa22.2■■□□□ 1.14
CPNE1-202ENST00000352393 H3BSH0 61 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 ZNF264O43296 627 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 IL33O95760 270 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 GPANK1O95872 356 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 AKAIN1P0CW23 69 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 GABRA1P14867 456 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 HSD17B7P56937 341 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 CCINQ13939 588 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 ODF4Q2M2E3 257 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 YOD1Q5VVQ6 348 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-202ENST00000352393 TMEM92Q6UXU6 159 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 THRSPQ92748 146 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 TOE1Q96GM8 510 aaKnown RBP22.19■■□□□ 1.14
CPNE1-202ENST00000352393 GMEB2Q9UKD1 530 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 YBX2Q9Y2T7 364 aaKnown RBP22.19■■□□□ 1.14
CPNE1-202ENST00000352393 DNAH14Q0VDD8 3507 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 GOSR2O14653 212 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 SRPX2O60687 465 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-202ENST00000352393 KDM4BO94953 1096 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 ITGA5P08648 1049 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 HPGDP15428 266 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 OC90Q02509 493 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-202ENST00000352393 DCAF12L2Q5VW00 463 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 ALKAL2Q6UX46 152 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 OTOSQ8NHW6 89 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 TAAR8Q969N4 342 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 KCNG2Q9UJ96 466 aa22.19■■□□□ 1.14
CPNE1-202ENST00000352393 TMEM272A0A1B0GTI8 110 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 C10orf142B7Z368 130 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 SCDO00767 359 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 UTS2O95399 124 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 GTF2F2P13984 249 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 TACR3P29371 465 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 GALNSP34059 522 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 UBE2MP61081 183 aaKnown RBP22.18■■□□□ 1.14
CPNE1-202ENST00000352393 KCNAB1Q14722 419 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 MPPED2Q15777 294 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 TMEM184AQ6ZMB5 413 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 OVCH2Q7RTZ1 564 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 FRMD1Q8N878 549 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 OR51S1Q8NGJ8 323 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 TSEN15Q8WW01 171 aaKnown RBP22.18■■□□□ 1.14
CPNE1-202ENST00000352393 ATOH1Q92858 354 aaPredicted RBP22.18■■□□□ 1.14
CPNE1-202ENST00000352393 KCNK15Q9H427 330 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 APMAPQ9HDC9 416 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 UNC80Q8N2C7 3258 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 TRAV18A0A075B6X5 111 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 TTLL8A6PVC2 850 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms