RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 NOVA1P51513 510 aaKnown RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 DYNC1I2Q13409 638 aaKnown RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 MFSD13AQ14CX5 517 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 ZNF829Q3KNS6 432 aaPredicted RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 TMPPEQ6ZT21 453 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 NR2C2APQ86WQ0 139 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 ZNF248Q8NDW4 579 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 HTRA1Q92743 480 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 GHSRQ92847 366 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 PDCD1LG2Q9BQ51 273 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 FANCFQ9NPI8 374 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 CCDC59Q9P031 241 aaKnown RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 KLHL13Q9P2N7 655 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 FKBP7Q9Y680 259 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 A0A087WZY1 265 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 A0A1W2PNV4 684 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 ARGFXA6NJG6 315 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 NPIPA5E9PKD4 350 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 TRAF3IP2O43734 574 aaPredicted RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 PRKAR1AP10644 381 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 ALOX5APP20292 161 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 H3F3AP84243 136 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 MFAP5Q13361 173 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 WIPI1Q5MNZ9 446 aaPredicted RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 ABHD17BQ5VST6 288 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 ADAD1Q96M93 576 aaKnown RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 KCTD7Q96MP8 289 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 NPIPA1Q9UND3 350 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 PCDHGB7Q9Y5F8 929 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 PHF3Q92576 2039 aaKnown RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 A0A1W2PPK0 400 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 ABHD16AO95870 558 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 HLA-DQA2P01906 255 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 CELA3AP09093 270 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 CSRP1P21291 193 aaKnown RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 ENPP1P22413 925 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 CLDN15P56746 228 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 SIRPAP78324 504 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 IFITM3Q01628 133 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 AIMP2Q13155 320 aaKnown RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 CAMK2DQ13557 499 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 GPALPP1Q8IXQ4 340 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 SYS1Q8N2H4 156 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 FAM83FQ8NEG4 500 aaPredicted RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 SRXN1Q9BYN0 137 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 B3GNT4Q9C0J1 378 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 NDEL1Q9GZM8 345 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 MMP27Q9H306 513 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 PLEKHB1Q9UF11 243 aaPredicted RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 HDGFL3Q9Y3E1 203 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 ZNF593O00488 134 aaPredicted RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 TNFSF11O14788 317 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 OGG1O15527 345 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 UPK3AO75631 287 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 SC5DO75845 299 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 RPP14O95059 124 aaKnown RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 HLA-DPB1P04440 258 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 CD97P48960 835 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 RPS11P62280 158 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDC42-202ENST00000344548 CDK5R1Q15078 307 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 TMEM225Q6GV28 225 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 JMJD6Q6NYC1 403 aaPredicted RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 ABHD4Q8TB40 342 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 SLC25A43Q8WUT9 341 aaPredicted RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 SLC25A46Q96AG3 418 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 ORAI1Q96D31 301 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 INTS14Q96SY0 518 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 MRPL13Q9BYD1 178 aaKnown RBP12.12□□□□□ -0.47
CDC42-202ENST00000344548 PLGRKTQ9HBL7 147 aa12.12□□□□□ -0.47
CDC42-202ENST00000344548 AQP7P3A6NL99 342 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 CLDN25C9JDP6 229 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 CEACAM1P13688 526 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 CNR1P21554 472 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 SRD5A2P31213 254 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 SUCLG1P53597 346 aaKnown RBP12.11□□□□□ -0.47
CDC42-202ENST00000344548 HNRNPA0Q13151 305 aaKnown RBP12.11□□□□□ -0.47
CDC42-202ENST00000344548 GPR50Q13585 617 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 OR1C1Q15619 314 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 INAQ16352 499 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 LIPNQ5VXI9 398 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 CARD17Q5XLA6 110 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 SPATC1Q76KD6 591 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 SYT9Q86SS6 491 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 OR14L1PQ8NHC6 308 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 NEIL3Q8TAT5 605 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 NSMAFQ92636 917 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 SNX18Q96RF0 628 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 SMAD5Q99717 465 aaKnown RBP12.11□□□□□ -0.47
CDC42-202ENST00000344548 SLCO1C1Q9NYB5 712 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 CSAG2Q9Y5P2 127 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 TRAPPC6AO75865 159 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 IL1AP01583 271 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 PTGS2P35354 604 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 DAP3P51398 398 aaKnown RBP12.11□□□□□ -0.47
CDC42-202ENST00000344548 ACTA2P62736 377 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 ACTG2P63267 376 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 CAMK2BQ13554 666 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 PLXDC2Q6UX71 529 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms