RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 STK35Q8TDR2 534 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF775Q96BV0 537 aaPredicted RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SMIM19Q96E16 107 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 MAP6Q96JE9 813 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 MED18Q9BUE0 208 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PARD6AQ9NPB6 346 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 FAIMQ9NVQ4 179 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SLCO1C1Q9NYB5 712 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 LAMP5Q9UJQ1 280 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 IKZF2Q9UKS7 526 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 FARSAQ9Y285 508 aaKnown RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 AK6Q9Y3D8 172 aaKnown RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PCDHGB2Q9Y5G2 931 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PCDHGA5Q9Y5G8 931 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF407Q9C0G0 2248 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 MAP1BP46821 2468 aaKnown RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 IGLV1-36A0A0B4J1U3 117 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 A0A0G2JK05 382 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 FUOMA2VDF0 154 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 OR2T1O43869 369 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ZIC3O60481 467 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 TRIM3O75382 744 aaPredicted RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ABHD16AO95870 558 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 RENP00797 406 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 RFPL3SP0C7P2 107 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF806P0C7X5 589 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ETV6P41212 452 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 GBX2P52951 348 aaPredicted RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 GPR139Q6DWJ6 353 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 FAM131AQ6UXB0 335 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF227Q86WZ6 799 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 YIPF7Q8N8F6 280 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 OR4K17Q8NGC6 315 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 NSMAFQ92636 917 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 LOXL4Q96JB6 756 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 TAAR9Q96RI9 348 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 NPDC1Q9NQX5 325 aaPredicted RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 P4HTMQ9NXG6 502 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 CRNNQ9UBG3 495 aaPredicted RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 IL17BQ9UHF5 180 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 TBC1D24Q9ULP9 559 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 RASD1Q9Y272 281 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 NCKAP5O14513 1909 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 FABP12A6NFH5 140 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 DLGAP3O95886 979 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 MT-CO3P00414 261 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PNPP00491 289 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 THBS2P35442 1172 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 HTR3AP46098 478 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SOX2P48431 317 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SSR4P51571 173 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 P2RY4P51582 365 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 MLF1P58340 268 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 HSF1Q00613 529 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 CAMK2DQ13557 499 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 TGIF1Q15583 401 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 EXT1Q16394 746 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 EMC4Q5J8M3 183 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 CEP78Q5JTW2 689 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 HES3Q5TGS1 186 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 LCN1P1Q5VSP4 162 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 CARD17Q5XLA6 110 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 CNIH2Q6PI25 160 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ESPNLQ6ZVH7 1005 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 GDPD3Q7L5L3 318 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PLCZ1Q86YW0 608 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 LINC00346Q8IVM7 164 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SYS1Q8N2H4 156 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 FADS6Q8N9I5 356 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 OR5H6Q8NGV6 325 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 MFSD8Q8NHS3 518 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 M1APQ8TC57 530 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PSMF1Q92530 271 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 NEDD4LQ96PU5 975 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 INTS14Q96SY0 518 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SRRQ9GZT4 340 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC25A18Q9H1K4 315 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 NOX4Q9NPH5 578 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SERINC1Q9NRX5 453 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 AKAP7Q9P0M2 348 aaPredicted RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 KLHL13Q9P2N7 655 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC22A13Q9Y226 551 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 POLHQ9Y253 713 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PCDHGB7Q9Y5F8 929 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 IGLV3-32A0A0A0MS00 114 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 LOC101059948A0A1B0GTJ6 334 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 HTR3EA5X5Y0 456 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 BOLA2-SMG1P6H3BVE0 249 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 ETV2O00321 342 aaPredicted RBP6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 SPARCP09486 303 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 ELK1P19419 428 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 RFC3P40938 356 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 BIDP55957 195 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 ACTA2P62736 377 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 ACTG2P63267 376 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 TOMM20Q15388 145 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 ATP1A1-AS1Q5TC04 95 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 DDI2Q5TDH0 399 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 CDCP2Q5VXM1 449 aa6.62□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC22A10Q63ZE4 541 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms