RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SMAD2Q15796 467 aaKnown RBP17.08■□□□□ 0.33
RFTN1-201ENST00000334133 COL28A1Q2UY09 1125 aa17.08■□□□□ 0.33
RFTN1-201ENST00000334133 WDR38Q5JTN6 314 aa17.08■□□□□ 0.33
RFTN1-201ENST00000334133 OR7E24Q6IFN5 339 aa17.08■□□□□ 0.33
RFTN1-201ENST00000334133 MAMDC2Q7Z304 686 aaPredicted RBP17.08■□□□□ 0.33
RFTN1-201ENST00000334133 CCDC74AQ96AQ1 378 aa17.08■□□□□ 0.33
RFTN1-201ENST00000334133 SCMH1Q96GD3 660 aa17.08■□□□□ 0.33
RFTN1-201ENST00000334133 PDCD5O14737 125 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 KHDRBS3O75525 346 aaKnown RBP17.08■□□□□ 0.32
RFTN1-201ENST00000334133 PNPP00491 289 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 HPXP02790 462 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 STOMP27105 288 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 CCKBRP32239 447 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 KIR3DL2P43630 455 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 C1orf140Q5VVS0 124 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 LYPD8Q6UX82 237 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 WDFY1Q8IWB7 410 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 TSEN15Q8WW01 171 aaKnown RBP17.08■□□□□ 0.32
RFTN1-201ENST00000334133 ADAMTS14Q8WXS8 1223 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 MVB12AQ96EY5 273 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 ARL5BQ96KC2 179 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.08■□□□□ 0.32
RFTN1-201ENST00000334133 B9D1Q9UPM9 204 aa17.08■□□□□ 0.32
RFTN1-201ENST00000334133 AFF3P51826 1226 aaKnown RBP17.07■□□□□ 0.32
RFTN1-201ENST00000334133 CBFBQ13951 182 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 PRR23CQ6ZRP0 262 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 RPS4Y2Q8TD47 263 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 TAS2R10Q9NYW0 307 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 NUBP2Q9Y5Y2 271 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 ANKRD34BA5PLL1 514 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 MEIS3P1A6NDR6 274 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 ZNF780AO75290 641 aaPredicted RBP17.07■□□□□ 0.32
RFTN1-201ENST00000334133 TOXO94900 526 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 DCTDP32321 178 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 GPLD1P80108 840 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 GALK2Q01415 458 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 FMODQ06828 376 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 TIGD3Q6B0B8 471 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 SLC41A2Q96JW4 573 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 SLITRK2Q9H156 845 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 MRPL22Q9NWU5 206 aaKnown RBP17.07■□□□□ 0.32
RFTN1-201ENST00000334133 MED11Q9P086 117 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 HRH3Q9Y5N1 445 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 PRSS37A4D1T9 235 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 SSNA1O43805 119 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 HTR2BP41595 481 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 PTH2RP49190 550 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 RNF4P78317 190 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 ADAM8P78325 824 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 FAM69AQ5T7M9 428 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 YOD1Q5VVQ6 348 aaPredicted RBP17.07■□□□□ 0.32
RFTN1-201ENST00000334133 ZNF574Q6ZN55 896 aaPredicted RBP17.07■□□□□ 0.32
RFTN1-201ENST00000334133 COX15Q7KZN9 410 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 SNAPC3Q92966 411 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 C8orf44Q96CB5 159 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 S100A16Q96FQ6 103 aaKnown RBP17.07■□□□□ 0.32
RFTN1-201ENST00000334133 CCNL2Q96S94 520 aaPredicted RBP17.07■□□□□ 0.32
RFTN1-201ENST00000334133 CDCP1Q9H5V8 836 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 HRASLSQ9HDD0 168 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 MYEF2Q9P2K5 600 aaKnown RBP17.07■□□□□ 0.32
RFTN1-201ENST00000334133 FOXJ3Q9UPW0 622 aa17.07■□□□□ 0.32
RFTN1-201ENST00000334133 TRIM3O75382 744 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-201ENST00000334133 VEGFCP49767 419 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 EFNB2P52799 333 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 GSG1Q2KHT4 349 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 LRRTM1Q86UE6 522 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 OR11H4Q8NGC9 324 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 OR51D1Q8NGF3 324 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 OTOSQ8NHW6 89 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 CHRNA10Q9GZZ6 450 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 COMMD4Q9H0A8 199 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 SLA2Q9H6Q3 261 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 MRPS17Q9Y2R5 130 aaKnown RBP17.06■□□□□ 0.32
RFTN1-201ENST00000334133 CELSR3Q9NYQ7 3312 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 NUP210LQ5VU65 1888 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 H3BML4 177 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 GDF9O60383 454 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 FADS1O60427 444 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 CD1AP06126 327 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 P2RX1P51575 399 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 CCR9P51686 369 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 RPL27P61353 136 aaKnown RBP17.06■□□□□ 0.32
RFTN1-201ENST00000334133 DCAF7P61962 342 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 GPR139Q6DWJ6 353 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 ARSKQ6UWY0 536 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 MAMSTRQ6ZN01 415 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 DND1Q8IYX4 353 aaKnown RBP17.06■□□□□ 0.32
RFTN1-201ENST00000334133 SUSD2Q9UGT4 822 aa17.06■□□□□ 0.32
RFTN1-201ENST00000334133 COA3Q9Y2R0 106 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-201ENST00000334133 RTTNQ86VV8 2226 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 POLR2HP52434 150 aaKnown RBP17.05■□□□□ 0.32
RFTN1-201ENST00000334133 MFGE8Q08431 387 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-201ENST00000334133 EMC4Q5J8M3 183 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 KCTD20Q7Z5Y7 419 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 LINC00346Q8IVM7 164 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 OR6C1Q96RD1 312 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 C20orf85Q9H1P6 137 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 SLC23A1Q9UHI7 598 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 MGAT4AQ9UM21 535 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 C7orf66A4D0T2 115 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms