RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 HMGB4Q8WW32 186 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 RAB40AQ8WXH6 277 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 COL26A1Q96A83 441 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 ISOC2Q96AB3 205 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 MVB12AQ96EY5 273 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 RRNAD1Q96FB5 475 aaKnown RBP6.85□□□□□ -1.31
TRIM49-201ENST00000329758 KIRREL1Q96J84 757 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 CAMK1GQ96NX5 476 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 NRTNQ99748 197 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 SNHG12Q9BXW3 62 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 ATG10Q9H0Y0 220 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 GSX1Q9H4S2 264 aaPredicted RBP6.85□□□□□ -1.31
TRIM49-201ENST00000329758 SPHK2Q9NRA0 654 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 INPP5EQ9NRR6 644 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 TAS2R8Q9NYW2 309 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 UPB1Q9UBR1 384 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 FBXO7Q9Y3I1 522 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 PRKAB1Q9Y478 270 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 ATG4BQ9Y4P1 393 aa6.85□□□□□ -1.31
TRIM49-201ENST00000329758 KIF26AQ9ULI4 1882 aaPredicted RBP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 TEX13DA0A0J9YY54 714 aaPredicted RBP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 A0A1W2PPQ1 181 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 SMCO3A2RU48 225 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 J3QRE1 110 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 GRM6O15303 877 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 HCRTR2O43614 444 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 GMFGO60234 142 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 TSPAN2O60636 221 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 PRAMEF4O60810 478 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 ADAP1O75689 374 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 ARL6IP5O75915 188 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 DAOP14920 347 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 EPORP19235 508 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 DCTDP32321 178 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 ATP6V1E1P36543 226 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 MC3RP41968 323 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 CDKN1BP46527 198 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 P2RX1P51575 399 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 CCR4P51679 360 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 SOX8P57073 446 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 UBE2MP61081 183 aaKnown RBP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 SNRPD1P62314 119 aaKnown RBP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 RBX1P62877 108 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 NKX6-1P78426 367 aaPredicted RBP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 PLA2G7Q13093 441 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 COL9A2Q14055 689 aaPredicted RBP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 SLBPQ14493 270 aaKnown RBP eCLIP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 TGIF1Q15583 401 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 CCSMST1Q4G0I0 132 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 COX20Q5RI15 118 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 FAM27D1Q5T7N8 215 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 PRAMEF9Q5VWM5 478 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 MRM1Q6IN84 353 aaKnown RBP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 C1orf94Q6P1W5 598 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 LRRC70Q7Z2Q7 622 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 ADCK2Q7Z695 626 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 TMPRSS11BQ86T26 416 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 IZUMO1Q8IYV9 350 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 NKAIN3Q8N8D7 197 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 OR1J2Q8NGS2 313 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 OR10R2Q8NGX6 335 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 OR5W2Q8NH69 310 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 ABHD4Q8TB40 342 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 ADAMTS17Q8TE56 1095 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 WFIKKN2Q8TEU8 576 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 FOXRED1Q96CU9 486 aaPredicted RBP6.84□□□□□ -1.31
TRIM49-201ENST00000329758 RSPRY1Q96DX4 576 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 MICU1Q9BPX6 476 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 ATG5Q9H1Y0 275 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 RGCCQ9H4X1 137 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 SEMA4GQ9NTN9 838 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 TDP1Q9NUW8 608 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 MOKQ9UQ07 419 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 SPEGQ15772 3267 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 C2orf16Q68DN1 1984 aa6.84□□□□□ -1.31
TRIM49-201ENST00000329758 TRBV5-4A0A0C4DH59 114 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.84□□□□□ -1.32
TRIM49-201ENST00000329758 GXYLT2A0PJZ3 443 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 OTOL1A6NHN0 477 aaPredicted RBP6.84□□□□□ -1.32
TRIM49-201ENST00000329758 C9J4A7 227 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 YY2O15391 372 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 STK16O75716 305 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 PLGP00747 810 aaPredicted RBP6.84□□□□□ -1.32
TRIM49-201ENST00000329758 GUSBP08236 651 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 CSF1P09603 554 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 ACP5P13686 325 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 MAOAP21397 527 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 NME2P22392 152 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 GABRR1P24046 479 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 MMP11P24347 488 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 HOXC12P31275 282 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 IL2RGP31785 369 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 ADH7P40394 386 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 OPRD1P41143 372 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 SLC6A9P48067 706 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 PTH2RP49190 550 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 ZNF84P51523 738 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 ST8SIA6P61647 398 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 SGCGQ13326 291 aa6.84□□□□□ -1.32
TRIM49-201ENST00000329758 CBFBQ13951 182 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms