RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 YES1P07947 543 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 APEHP13798 732 aaKnown RBP13.3□□□□□ -0.28
CLK4-201ENST00000316308 GZMKP49863 264 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 Q499Y3 187 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 C1orf140Q5VVS0 124 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 PRR23CQ6ZRP0 262 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 TMPRSS12Q86WS5 348 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 OR5M1Q8NGP8 315 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 PHF3Q92576 2039 aaKnown RBP13.3□□□□□ -0.28
CLK4-201ENST00000316308 SLC7A5P2Q9GIP4 190 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 GHITMQ9H3K2 345 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 ELOVL3Q9HB03 270 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 FBXL3Q9UKT7 428 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 U3KQA8 63 aa13.3□□□□□ -0.28
CLK4-201ENST00000316308 PRSS37A4D1T9 235 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 TO15178 435 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 FABP7O15540 132 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 GPRIN2O60269 458 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 HPXP02790 462 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 SPARCP09486 303 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 CDK2P24941 298 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 PTH2RP49190 550 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 UBE2NLQ5JXB2 153 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 OR7E24Q6IFN5 339 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 FAM220AQ7Z4H9 259 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 TCTE3Q8IZS6 198 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 ZNF676Q8N7Q3 588 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 OTOSQ8NHW6 89 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 AKAP1Q92667 903 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLK4-201ENST00000316308 MED29Q9NX70 200 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 MOKQ9UQ07 419 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
CLK4-201ENST00000316308 FAM172BPA6NC97 362 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 H3BML4 177 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 EFNA2O43921 213 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 RENP00797 406 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 PGCP20142 388 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 P2RX1P51575 399 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 PNLIPRP2P54317 469 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 SNTA1Q13424 505 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 CBFBQ13951 182 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 ST3GAL2Q16842 350 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 FAM69AQ5T7M9 428 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 OR11H4Q8NGC9 324 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 ZNF519Q8TB69 540 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 SMIM4Q8WVI0 70 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 PHF21AQ96BD5 680 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 GAL3ST1Q99999 423 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 ZNF768Q9H5H4 540 aaKnown RBP13.29□□□□□ -0.28
CLK4-201ENST00000316308 TAS2R10Q9NYW0 307 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 SEMA5BQ9P283 1151 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 TEKT2Q9UIF3 430 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 MRTO4Q9UKD2 239 aaKnown RBP13.29□□□□□ -0.28
CLK4-201ENST00000316308 CAMK2AQ9UQM7 478 aa13.29□□□□□ -0.28
CLK4-201ENST00000316308 COA3Q9Y2R0 106 aaPredicted RBP13.29□□□□□ -0.28
CLK4-201ENST00000316308 PDGFBP01127 241 aaPredicted RBP13.28□□□□□ -0.28
CLK4-201ENST00000316308 IGF2P01344 180 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 DCTDP32321 178 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 DHPSP49366 369 aaPredicted RBP13.28□□□□□ -0.28
CLK4-201ENST00000316308 CCL7P80098 99 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 BIKQ13323 160 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 SNTB2Q13425 540 aaKnown RBP13.28□□□□□ -0.28
CLK4-201ENST00000316308 YOD1Q5VVQ6 348 aaPredicted RBP13.28□□□□□ -0.28
CLK4-201ENST00000316308 LINC00346Q8IVM7 164 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 SCMH1Q96GD3 660 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 KLHL15Q96M94 604 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 EMC6Q9BV81 110 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLK4-201ENST00000316308 TMEM185BQ9H7F4 350 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 TCF7L1Q9HCS4 588 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 FOXJ3Q9UPW0 622 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 IGLV1-36A0A0B4J1U3 117 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 TRBV5-5A0A0J9YX44 114 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 MEIS3P1A6NDR6 274 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 MASP2O00187 686 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 PLPP3O14495 311 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 XKRYO14609 159 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 LMX1BO60663 402 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 CD1AP06126 327 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 SLC6A8P48029 635 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 CXCL12P48061 93 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 RPL27P61353 136 aaKnown RBP13.28□□□□□ -0.28
CLK4-201ENST00000316308 HSF2Q03933 536 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 SGCBQ16585 318 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 BTBD16Q32M84 506 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 CORO6Q6QEF8 472 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 LYPD8Q6UX82 237 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 MAMDC2Q7Z304 686 aaPredicted RBP13.28□□□□□ -0.28
CLK4-201ENST00000316308 ANKRD37Q7Z713 158 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
CLK4-201ENST00000316308 HLA-CQ95604 372 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 DPAGT1Q9H3H5 408 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 CDCP1Q9H5V8 836 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 MYEF2Q9P2K5 600 aaKnown RBP13.28□□□□□ -0.28
CLK4-201ENST00000316308 EXPH5Q8NEV8 1989 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 FRYQ5TBA9 3013 aa13.28□□□□□ -0.28
CLK4-201ENST00000316308 A0A1W2PQD3 144 aa13.27□□□□□ -0.28
CLK4-201ENST00000316308 MS4A18H0YCH9 400 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms