RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF44P15621 663 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 RAB6AP20340 208 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 AFF3P51826 1226 aaKnown RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 ESCO2Q56NI9 601 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 RNF165Q6ZSG1 346 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 BCORP1Q8N888 145 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 IL1F10Q8WWZ1 152 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 EID2BQ96D98 161 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 CD300LBA8K4G0 201 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 KRBOX1C9JBD0 128 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 SIGLEC6O43699 453 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 CALCBP10092 127 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 MSX1P28360 303 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 SYS1Q8N2H4 156 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 KDM8Q8N371 416 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 OR10K1Q8NGX5 313 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 CCNL2Q96S94 520 aaPredicted RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 RBM38Q9H0Z9 239 aaKnown RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 COA3Q9Y2R0 106 aaPredicted RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 PPIL1Q9Y3C6 166 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 PRAMEF27A3QJZ7 478 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 PMS2P2O95744 297 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 ST6GAL1P15907 406 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 PPP2CBP62714 309 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 PPP2CAP67775 309 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 GABREP78334 506 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 DYRK1AQ13627 763 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 BCL2A1Q16548 175 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 EIF2S3LQ2VIR3 472 aaKnown RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 PRAMEF9Q5VWM5 478 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 RADILQ96JH8 1075 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 CGGBP1Q9UFW8 167 aaPredicted RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 RAB22AQ9UL26 194 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 KCNE1BA0A087WTH5 132 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 A0A087WV62 115 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 A0A1B0GX78 115 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 K7EPK0 472 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 TK1P04183 234 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 CD27P26842 260 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 DPP4P27487 766 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 FAM71E2Q8N5Q1 922 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 OR5T1Q8NG75 326 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 PAPOLGQ9BWT3 736 aaKnown RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 BIN3Q9NQY0 253 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 A0A0B4J2A0 478 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 PPM1DO15297 605 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 ZNF749O43361 778 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 MRPL33O75394 65 aaKnown RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 MED6O75586 246 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 SIX6O95475 246 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 FOSL2P15408 326 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 LUMP51884 338 aaPredicted RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 RAE1P78406 368 aaKnown RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 H1FNTQ75WM6 255 aaPredicted RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 AAED1Q7RTV5 226 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 SVBPQ8N300 66 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 OR51S1Q8NGJ8 323 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 TEX101Q9BY14 249 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 SLIRPQ9GZT3 109 aaKnown RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 SLC38A1Q9H2H9 487 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 SHPKQ9UHJ6 478 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 A0A0A6YYD5 115 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 TRAPPC2LH3BP13 241 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 ANXA7P20073 488 aaKnown RBP12.63□□□□□ -0.39
SPAST-201ENST00000315285 SDHAP31040 664 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 PEA15Q15121 130 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 C14orf28Q4W4Y0 310 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 AGBL4Q5VU57 503 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 NPSR1Q6W5P4 371 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 SLC51BQ86UW2 128 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 CA13Q8N1Q1 262 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 DDOQ99489 341 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 ACAD8Q9UKU7 415 aa12.63□□□□□ -0.39
SPAST-201ENST00000315285 COL24A1Q17RW2 1714 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 A0A1W2PS29 197 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 MAGEB4O15481 346 aaPredicted RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 DDAH2O95865 285 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 RAF1P04049 648 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 RPL23AP62750 156 aaKnown RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 YOD1Q5VVQ6 348 aaPredicted RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 SYT9Q86SS6 491 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 ESX1Q8N693 406 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 OR13C5Q8NGS8 318 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 HSD17B8Q92506 261 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 DCLRE1CQ96SD1 692 aaKnown RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 MED18Q9BUE0 208 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 LUZP4Q9P127 313 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 MED16Q9Y2X0 877 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 C2orf72A6NCS6 295 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 M0R082 166 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 EIF1P41567 113 aaKnown RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 SSR4P51571 173 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 METAP1P53582 386 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 OR1D5P58170 312 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 TGFBR3Q03167 851 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 C9orf135Q5VTT2 229 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 ALG14Q96F25 216 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms