RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 B8ZZF3 427 aa11.21□□□□□ -0.61
RNF4-201ENST00000314289 PXDC1Q5TGL8 231 aa11.21□□□□□ -0.61
RNF4-201ENST00000314289 PRAMEF20Q5VT98 475 aa11.21□□□□□ -0.61
RNF4-201ENST00000314289 YOD1Q5VVQ6 348 aaPredicted RBP11.21□□□□□ -0.61
RNF4-201ENST00000314289 C1orf140Q5VVS0 124 aa11.21□□□□□ -0.61
RNF4-201ENST00000314289 ZNF385CQ66K41 422 aaPredicted RBP11.21□□□□□ -0.61
RNF4-201ENST00000314289 SFXN4Q6P4A7 337 aa11.21□□□□□ -0.61
RNF4-201ENST00000314289 CPEB2Q7Z5Q1 589 aaKnown RBP11.21□□□□□ -0.61
RNF4-201ENST00000314289 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
RNF4-201ENST00000314289 DIABLOQ9NR28 239 aa11.21□□□□□ -0.61
RNF4-201ENST00000314289 EP300Q09472 2414 aaPredicted RBP11.21□□□□□ -0.61
RNF4-201ENST00000314289 TRAV36DV7A0A075B6V5 113 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 DOK2O60496 412 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 EIF4E2O60573 245 aaKnown RBP11.21□□□□□ -0.62
RNF4-201ENST00000314289 EIF4EP06730 217 aaKnown RBP11.21□□□□□ -0.62
RNF4-201ENST00000314289 SYPP08247 313 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 PNLIPP16233 465 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 SOX2P48431 317 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 RPS11P62280 158 aaKnown RBP eCLIP11.21□□□□□ -0.62
RNF4-201ENST00000314289 GPR176Q14439 515 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 CDONQ4KMG0 1287 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 MTFR2Q6P444 385 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 GLRX5Q86SX6 157 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 WDFY1Q8IWB7 410 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 SMIM19Q96E16 107 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 ENAMQ9NRM1 1142 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 B3GNT2Q9NY97 397 aa11.21□□□□□ -0.62
RNF4-201ENST00000314289 CCDC163A0A0D9SF12 145 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 OR6C76A6NM76 312 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ZFPL1O95159 310 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ANKRD34CP0C6C1 535 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 SNRPBP14678 240 aaKnown RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 MTNR1BP49286 362 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 POLR2HP52434 150 aaKnown RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 AP2S1P53680 142 aaPredicted RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 GGTLC2Q14390 218 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 OR7A5Q15622 319 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ZNF433Q8N7K0 673 aaPredicted RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 NAT6Q93015 286 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 MR1Q95460 341 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ARPC5LQ9BPX5 153 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ULBP3Q9BZM4 244 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ABCG5Q9H222 651 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 FKRPQ9H9S5 495 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 PRMT8Q9NR22 394 aaPredicted RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 NUDT15Q9NV35 164 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 MRPS7Q9Y2R9 242 aaKnown RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 CACNA1HO95180 2353 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 A0A1W2PQD3 144 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 XKRYO14609 159 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 SLC16A7O60669 478 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 SLC22A5O76082 557 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 OR6A2O95222 327 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 MPZL1O95297 269 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 TFPIP10646 304 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ZNF250P15622 560 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ENPP1P22413 925 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ACTA2P62736 377 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ACTG2P63267 376 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 SNTA1Q13424 505 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 FAM69AQ5T7M9 428 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 LIPNQ5VXI9 398 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 MZT2AQ6P582 158 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 IDO2Q6ZQW0 420 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 MAMDC2Q7Z304 686 aaPredicted RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 NKX3-1Q99801 234 aaPredicted RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 SOSTQ9BQB4 213 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 SEMA4CQ9C0C4 833 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 KCNG2Q9UJ96 466 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 ING4Q9UNL4 249 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 GTF2A1LQ9UNN4 478 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 COL5A1P20908 1838 aaPredicted RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 TNRC6BQ9UPQ9 1833 aaKnown RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 PMS2P1A4D2B8 440 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 D6RAR5 112 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 G3V3Y1 287 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 PDGFAP04085 211 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 SSTR2P30874 369 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 SRP9P49458 86 aaKnown RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 PER3P56645 1201 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 CLDN12P56749 244 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 TAS2R43P59537 309 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 GRINAQ7Z429 371 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 TMEM105Q8N8V8 129 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 EXD3Q8N9H8 876 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 OR8K3Q8NH51 312 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 LIPHQ8WWY8 451 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 CDCP1Q9H5V8 836 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 NOX4Q9NPH5 578 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 MRM2Q9UI43 246 aaKnown RBP11.2□□□□□ -0.62
RNF4-201ENST00000314289 LAMP5Q9UJQ1 280 aa11.2□□□□□ -0.62
RNF4-201ENST00000314289 A0A0G2JK05 382 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 EEF1E1O43324 174 aaKnown RBP11.19□□□□□ -0.62
RNF4-201ENST00000314289 SC5DO75845 299 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 THBS2P35442 1172 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 SLC26A5P58743 744 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 FOXF1Q12946 379 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 HBMQ6B0K9 141 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 MDGA2Q7Z553 956 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 ZNF680Q8NEM1 530 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms