RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 TMEFF2Q9UIK5 374 aaPredicted RBP14.99□□□□□ -0.01
BRD3-201ENST00000303407 SDHAP31040 664 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 SOX18P35713 384 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 DDOSTP39656 456 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 APOBEC1P41238 236 aaKnown RBP14.99□□□□□ -0.01
BRD3-201ENST00000303407 CAPZBP47756 277 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 KIAA0040Q15053 153 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 TMEM215Q68D42 235 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 HMGCLL1Q8TB92 370 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 SLC35B4Q969S0 331 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 UTP23Q9BRU9 249 aaKnown RBP14.99□□□□□ -0.01
BRD3-201ENST00000303407 CDCP1Q9H5V8 836 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 GPR55Q9Y2T6 319 aaPredicted RBP14.99□□□□□ -0.01
BRD3-201ENST00000303407 NPFFR2Q9Y5X5 522 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 CD46P15529 392 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 FABP5Q01469 135 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 AGERQ15109 404 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 ISYNA1Q9NPH2 558 aa14.99□□□□□ -0.01
BRD3-201ENST00000303407 DOCK5Q9H7D0 1870 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 OR6C76A6NM76 312 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 M0R082 166 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 ZNF44P15621 663 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 RNF165Q6ZSG1 346 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 Q6ZTK2 550 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 NKAIN3Q8N8D7 197 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 C16orf52Q8NHV5 167 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 LRFN5Q96NI6 719 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 LRRC37AA6NMS7 1700 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 ANKRD31Q8N7Z5 1873 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 CD300LBA8K4G0 201 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 H0YIG0 161 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 EIF1BO60739 113 aaKnown RBP14.98□□□□□ -0.01
BRD3-201ENST00000303407 F10P00742 488 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 ZNF93P35789 620 aaPredicted RBP14.98□□□□□ -0.01
BRD3-201ENST00000303407 MFAP5Q13361 173 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 ASAH1Q13510 395 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 OPCMLQ14982 345 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 LAT2Q9GZY6 243 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 ZNF346Q9UL40 294 aaKnown RBP14.98□□□□□ -0.01
BRD3-201ENST00000303407 SULT1B1O43704 296 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 PMP2P02689 132 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 PMPCAQ10713 525 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 VWA2Q5GFL6 755 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 LILRA6Q6PI73 481 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 USP51Q70EK9 711 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 RNF128Q8TEB7 428 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 TSLPQ969D9 159 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 LRRC46Q96FV0 321 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 OR5B12Q96R08 314 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 PPA2Q9H2U2 334 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 B3GNT2Q9NY97 397 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 ATAD5Q96QE3 1844 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 SLC22A23A1A5C7 686 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 MC2RQ01718 297 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 GLYR1Q49A26 553 aaPredicted RBP14.98□□□□□ -0.01
BRD3-201ENST00000303407 TP53I13Q8NBR0 393 aaPredicted RBP14.98□□□□□ -0.01
BRD3-201ENST00000303407 OR6M1Q8NGM8 313 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 OCEL1Q9H607 264 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 UNKLQ9H9P5 680 aaKnown RBP14.98□□□□□ -0.01
BRD3-201ENST00000303407 KCNE3Q9Y6H6 103 aa14.98□□□□□ -0.01
BRD3-201ENST00000303407 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 A0A0D9SG52 128 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 TNFSF12O43508 249 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 DDAH2O95865 285 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 CISD3P0C7P0 127 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 TGM4P49221 684 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 TGFBR3Q03167 851 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 CLVS2Q5SYC1 327 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 YOD1Q5VVQ6 348 aaPredicted RBP14.97□□□□□ -0.01
BRD3-201ENST00000303407 RFPL4BQ6ZWI9 263 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 GPR155Q7Z3F1 870 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 CGGBP1Q9UFW8 167 aaPredicted RBP14.97□□□□□ -0.01
BRD3-201ENST00000303407 MUTYHQ9UIF7 546 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 FBXL2Q9UKC9 423 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 RAB22AQ9UL26 194 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 TMEM184BQ9Y519 407 aaPredicted RBP14.97□□□□□ -0.01
BRD3-201ENST00000303407 SCN1AP35498 2009 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 PRKNO60260 465 aaPredicted RBP14.97□□□□□ -0.01
BRD3-201ENST00000303407 NFYAP23511 347 aaPredicted RBP14.97□□□□□ -0.01
BRD3-201ENST00000303407 BLVRBP30043 206 aaPredicted RBP14.97□□□□□ -0.01
BRD3-201ENST00000303407 C9orf50Q5SZB4 431 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 CPT1CQ8TCG5 803 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 PHF7Q9BWX1 381 aaPredicted RBP14.97□□□□□ -0.01
BRD3-201ENST00000303407 NEU3Q9UQ49 428 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 EMC4Q5J8M3 183 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 LIPNQ5VXI9 398 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 FAM109AQ8N4B1 249 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 OR13C5Q8NGS8 318 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 SAV1Q9H4B6 383 aaPredicted RBP14.97□□□□□ -0.01
BRD3-201ENST00000303407 AKIP1Q9NQ31 210 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 ANKRD10Q9NXR5 420 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 SULT1C4O75897 302 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 CALCBP10092 127 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 CCR9P51686 369 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 SF3B4Q15427 424 aaKnown RBP eCLIP14.97□□□□□ -0.01
BRD3-201ENST00000303407 EXT1Q16394 746 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 PRTGQ2VWP7 1150 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 PRSS36Q5K4E3 855 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 ALKAL2Q6UX46 152 aa14.97□□□□□ -0.01
BRD3-201ENST00000303407 ZNF845Q96IR2 970 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms