RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PRKACAP17612 351 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 TPMTP51580 245 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 C21orf58P58505 322 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 BCL2A1Q16548 175 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 WDFY2Q96P53 400 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 CSF3RQ99062 836 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 CDH20Q9HBT6 801 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 FGF21Q9NSA1 209 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 LRFN1Q9P244 771 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 RFXAPO00287 272 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 ACHEP22303 614 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 OR51S1Q8NGJ8 323 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 RNF141Q8WVD5 230 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 DVL3Q92997 716 aaPredicted RBP17.72■□□□□ 0.43
TSR1-201ENST00000301364 IL20Q9NYY1 176 aa17.72■□□□□ 0.43
TSR1-201ENST00000301364 A0A0A6YYJ9 748 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 HSPB2A8KAH6 182 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 E9PI62 339 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 ZNF780AO75290 641 aaPredicted RBP17.71■□□□□ 0.43
TSR1-201ENST00000301364 CD1CP29017 333 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 HSPB2Q16082 182 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 ZNF611Q8N823 705 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 RCBTB1Q8NDN9 531 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 FGGYQ96C11 551 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 SMIM3Q9BZL3 60 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 ULBP3Q9BZM4 244 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 hCG_1807616A0A1W2PRN6 198 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 M0QYG6 137 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 CXCL12P48061 93 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 TGM4P49221 684 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 RPL23AP62750 156 aaKnown RBP17.71■□□□□ 0.43
TSR1-201ENST00000301364 PLA2G7Q13093 441 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 MCTS1Q9ULC4 181 aaKnown RBP17.71■□□□□ 0.43
TSR1-201ENST00000301364 ADAM18Q9Y3Q7 739 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 WIF1Q9Y5W5 379 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 IFITM5A6NNB3 132 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 MED6O75586 246 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 MFGE8Q08431 387 aaPredicted RBP17.71■□□□□ 0.43
TSR1-201ENST00000301364 MARCH3Q86UD3 253 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 LINC00346Q8IVM7 164 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 TCTE3Q8IZS6 198 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 ATF6BQ99941 703 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 SMCO3A2RU48 225 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 ANKRD30BLA7E2S9 258 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 EIF4EP06730 217 aaKnown RBP17.71■□□□□ 0.43
TSR1-201ENST00000301364 ANXA7P20073 488 aaKnown RBP17.71■□□□□ 0.43
TSR1-201ENST00000301364 H1FNTQ75WM6 255 aaPredicted RBP17.71■□□□□ 0.43
TSR1-201ENST00000301364 SGCZQ96LD1 299 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 SLC6A18Q96N87 628 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 ARHGDIGQ99819 225 aa17.71■□□□□ 0.43
TSR1-201ENST00000301364 SCRG1O75711 98 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 FCGR2AP12318 317 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 CPT2P23786 658 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 BLVRBP30043 206 aaPredicted RBP17.7■□□□□ 0.42
TSR1-201ENST00000301364 APLNRP35414 380 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 EIF1P41567 113 aaKnown RBP17.7■□□□□ 0.42
TSR1-201ENST00000301364 EMP3P54852 163 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 MTCP1P56278 107 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 SEC61A1P61619 476 aaKnown RBP17.7■□□□□ 0.42
TSR1-201ENST00000301364 PLCXD3Q63HM9 321 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 PAPD4Q6PIY7 484 aaKnown RBP17.7■□□□□ 0.42
TSR1-201ENST00000301364 GPR137BO60478 399 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 TK1P04183 234 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 GABREP78334 506 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 CDKN3Q16667 212 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 TMUB2Q71RG4 321 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 OR2L13Q8N349 312 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 BCORP1Q8N888 145 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 NSA2O95478 260 aaKnown RBP17.7■□□□□ 0.42
TSR1-201ENST00000301364 CEACAM5P06731 702 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 DBHP09172 617 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 RAB6AP20340 208 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 MSX1P28360 303 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 TIAL1Q01085 375 aaKnown RBP eCLIP17.7■□□□□ 0.42
TSR1-201ENST00000301364 ACSM1Q08AH1 577 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 LYSMD4Q5XG99 296 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 DCXRQ7Z4W1 244 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 FBXL6Q8N531 539 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 ENKD1Q9H0I2 346 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 FAM212BQ9NTI7 297 aaPredicted RBP17.7■□□□□ 0.42
TSR1-201ENST00000301364 KNL1Q8NG31 2342 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 TTLL8A6PVC2 850 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 ZNF749O43361 778 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 CHATP28329 748 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 ARF1P84077 181 aaKnown RBP17.7■□□□□ 0.42
TSR1-201ENST00000301364 MFAP5Q13361 173 aa17.7■□□□□ 0.42
TSR1-201ENST00000301364 NLGN4YQ8NFZ3 816 aaPredicted RBP17.7■□□□□ 0.42
TSR1-201ENST00000301364 NSG1A0A0A6YYJ2 146 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 BCAT2O15382 392 aaPredicted RBP17.69■□□□□ 0.42
TSR1-201ENST00000301364 STK17BO94768 372 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 DDAH2O95865 285 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 CD79AP11912 226 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 POU3F2P20265 443 aaPredicted RBP17.69■□□□□ 0.42
TSR1-201ENST00000301364 HCCSP53701 268 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 CLDN17P56750 224 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 CDK5Q00535 292 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 MDGA2Q7Z553 956 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 NEU3Q9UQ49 428 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 LTBP4Q8N2S1 1624 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms