RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PTNP21246 168 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 EEF1B2P24534 225 aaKnown RBP18.66■□□□□ 0.58
SMCO4-201ENST00000298966 FXYD6P3P58550 94 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 SLC35A2P78381 396 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 EFNB1P98172 346 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 FHL1Q13642 323 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 WIPI1Q5MNZ9 446 aaPredicted RBP18.66■□□□□ 0.58
SMCO4-201ENST00000298966 IQCF1Q8N6M8 205 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 ADPRHL1Q8NDY3 354 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 OR4Q3Q8NH05 313 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 PIGMQ9H3S5 423 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 KLHL21Q9UJP4 597 aa18.66■□□□□ 0.58
SMCO4-201ENST00000298966 FTCDNL1E5RQL4 147 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 SURF4O15260 269 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 DNPH1O43598 174 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 CRLF1O75462 422 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 ACTL6AO96019 429 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 TFPIP10646 304 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 ALDH3B2P48448 385 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 RAC1P63000 192 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 CLEC12AQ5QGZ9 265 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 EEF1A1P5Q5VTE0 462 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 RAET1LQ5VY80 246 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 GPR139Q6DWJ6 353 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 INTS12Q96CB8 462 aaKnown RBP18.65■□□□□ 0.58
SMCO4-201ENST00000298966 MOGAT1Q96PD6 335 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 NRIP3Q9NQ35 241 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 CMC2Q9NRP2 79 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 PSORS1C1Q9UIG5 152 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 B3GALT5Q9Y2C3 310 aa18.65■□□□□ 0.58
SMCO4-201ENST00000298966 IRGMA1A4Y4 181 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 ZC3H12DA2A288 527 aaKnown RBP18.64■□□□□ 0.57
SMCO4-201ENST00000298966 RIIAD1A6NNX1 92 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 SEC14L5O43304 696 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 XPNPEP2O43895 674 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 OR6A2O95222 327 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 CNOT4O95628 575 aaKnown RBP18.64■□□□□ 0.57
SMCO4-201ENST00000298966 CD14P08571 375 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 RPL4P36578 427 aaKnown RBP18.64■□□□□ 0.57
SMCO4-201ENST00000298966 ZP4Q12836 540 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 SMN1Q16637 294 aaKnown RBP18.64■□□□□ 0.57
SMCO4-201ENST00000298966 ALG10Q5BKT4 473 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 C20orf204Q6ZNR8 217 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 TCEANCQ8N8B7 351 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 RFKQ969G6 155 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 PIK3IP1Q96FE7 263 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 TUBA1CQ9BQE3 449 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 VCX3AQ9NNX9 186 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 FANCFQ9NPI8 374 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 FKBP14Q9NWM8 211 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 CNOT2Q9NZN8 540 aaKnown RBP18.64■□□□□ 0.57
SMCO4-201ENST00000298966 NDUFA13Q9P0J0 144 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 AASSQ9UDR5 926 aa18.64■□□□□ 0.57
SMCO4-201ENST00000298966 OR2M5A3KFT3 312 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 NPIPB13A6NJU9 1138 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 LIPT2A6NK58 231 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 RNF212BA8MTL3 300 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 A8MXE2 369 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 NPIPB4C9JG80 1138 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 M0R129 80 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 PMS2P2O95744 297 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 HTR1AP08908 422 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 CPN1P15169 458 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 ZNF3P17036 446 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 PAICSP22234 425 aaKnown RBP18.63■□□□□ 0.57
SMCO4-201ENST00000298966 NOS3P29474 1203 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 GRPRP30550 384 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 TMED1Q13445 227 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 ZNF239Q16600 458 aaKnown RBP18.63■□□□□ 0.57
SMCO4-201ENST00000298966 THSD4Q6ZMP0 1018 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 YRDCQ86U90 279 aaKnown RBP18.63■□□□□ 0.57
SMCO4-201ENST00000298966 LRRC17Q8N6Y2 441 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 ZNF540Q8NDQ6 660 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 OR14L1PQ8NHC6 308 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 WNT2BQ93097 391 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 GSX2Q9BZM3 304 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 OR11A1Q9GZK7 315 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 FAM192AQ9GZU8 254 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 PAK1IP1Q9NWT1 392 aaPredicted RBP18.63■□□□□ 0.57
SMCO4-201ENST00000298966 RPL36Q9Y3U8 105 aaKnown RBP18.63■□□□□ 0.57
SMCO4-201ENST00000298966 PCDHGB1Q9Y5G3 927 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 SNX5Q9Y5X3 404 aa18.63■□□□□ 0.57
SMCO4-201ENST00000298966 ANK3Q12955 4377 aaKnown RBP18.63■□□□□ 0.57
SMCO4-201ENST00000298966 SMIM31A0A1B0GVY4 71 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 EFCAB10A6NFE3 127 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 DEFB108AA8MXU0 73 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 BLOC1S5-TXNDC5H3BN57 136 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 PRODHO43272 600 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 TLX2O43763 284 aaPredicted RBP18.62■□□□□ 0.57
SMCO4-201ENST00000298966 EFNA2O43921 213 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 PRKYO43930 277 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 TXNDC12O95881 172 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 PIPP12273 146 aaPredicted RBP18.62■□□□□ 0.57
SMCO4-201ENST00000298966 JUNBP17275 347 aaPredicted RBP18.62■□□□□ 0.57
SMCO4-201ENST00000298966 CSNK2A1P68400 391 aaPredicted RBP18.62■□□□□ 0.57
SMCO4-201ENST00000298966 SLC35A1P78382 337 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 RPL18Q07020 188 aaKnown RBP18.62■□□□□ 0.57
SMCO4-201ENST00000298966 PMS2P3Q13401 168 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 NXNL2Q5VZ03 156 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 H1FNTQ75WM6 255 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms