RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CACNA1DQ01668 2161 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 ZNF616Q08AN1 781 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 SLC35D2Q76EJ3 337 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 ZDHHC5Q9C0B5 715 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 GAREM1Q9H706 876 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 GGT3PA6NGU5 568 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 OR2T1O43869 369 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 CTSLP07711 333 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 HPGDP15428 266 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 NME1P15531 152 aaKnown RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 EFNB2P52799 333 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 SEC13P55735 322 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 TRMT12Q53H54 448 aaKnown RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 EIPR1Q53HC9 387 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 PWWP2BQ6NUJ5 590 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 SETD7Q8WTS6 366 aaKnown RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 RGP1Q92546 391 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 FAM86C1Q9NVL1 165 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 SLC23A2Q9UGH3 650 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 MTCL1Q9Y4B5 1905 aaKnown RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 A0A0A6YYC8 382 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 MED19A0JLT2 244 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 RFPL4AA6NLU0 287 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 OR5K4A6NMS3 321 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 RFPL4AL1F8VTS6 287 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 I3L1I5 382 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 OR10H2O60403 315 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 NUDT14O95848 222 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 F13BP05160 661 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 GP1BAP07359 652 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 ACAA1P09110 424 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 PPIAP62937 165 aaKnown RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 FAM199XQ6PEV8 388 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 STAC2Q6ZMT1 411 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 WDR88Q6ZMY6 472 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 PARGQ86W56 976 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 EIF5A2Q9GZV4 153 aaKnown RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 RXFP3Q9NSD7 469 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 PRR13Q9NZ81 148 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 CGGBP1Q9UFW8 167 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-201ENST00000297423 OR6C65A6NJZ3 312 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 HMSDA8MTL9 139 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 SCGB1D2O95969 90 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 CSF1P09603 554 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 PI3P19957 117 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 MST1P26927 711 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 GNALP38405 381 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 DEFA6Q01524 100 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 BDH1Q02338 343 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 POU4F2Q12837 409 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 COMMD2Q86X83 199 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 OR10AC1Q8NH08 325 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 MAFIPQ8WZ33 124 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 RASL12Q9NYN1 266 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 XIRP2A4UGR9 3374 aa13.57□□□□□ -0.24
SPIDR-201ENST00000297423 OR2M5A3KFT3 312 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 OTOL1A6NHN0 477 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-201ENST00000297423 ZNF736B4DX44 427 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-201ENST00000297423 MED6O75586 246 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 TXNDC12O95881 172 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 PRH1P02810 166 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 THY1P04216 161 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 RAB40ALP0C0E4 278 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 FOSL1P15407 271 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 SLC9A3R2Q15599 337 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 ELAVL1Q15717 326 aaKnown RBP13.56□□□□□ -0.24
SPIDR-201ENST00000297423 LIPNQ5VXI9 398 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 OR6K3Q8NGY3 331 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 ST7LQ8TDW4 575 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 RAB40AQ8WXH6 277 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 SLC22A7Q9Y694 548 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 C11orf98E9PRG8 122 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 LCN10Q6JVE6 187 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 PARM1Q6UWI2 310 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 ERN2Q76MJ5 926 aaKnown RBP13.56□□□□□ -0.24
SPIDR-201ENST00000297423 OVCH1Q7RTY7 1134 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 OR7G2Q8NG99 324 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 EXOSC3Q9NQT5 275 aaKnown RBP13.56□□□□□ -0.24
SPIDR-201ENST00000297423 C4orf47A7E2U8 309 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 CPN1P15169 458 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 PTAFRP25105 342 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 RAB2AP61019 212 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 EBPQ15125 230 aaKnown RBP13.56□□□□□ -0.24
SPIDR-201ENST00000297423 ARHGAP11AQ6P4F7 1023 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 LCTLQ6UWM7 567 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 ZNF584Q8IVC4 421 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 GLYATL2Q8WU03 294 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 SULT4A1Q9BR01 284 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 RGCCQ9H4X1 137 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 PLXND1Q9Y4D7 1925 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 ICOSLGO75144 302 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 GPANK1O95872 356 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 TACSTD2P09758 323 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 TLX1P31314 330 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-201ENST00000297423 EFNB1P98172 346 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 BIKQ13323 160 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 RNASE10Q5GAN6 216 aaKnown RBP13.56□□□□□ -0.24
SPIDR-201ENST00000297423 STPG1Q5TH74 334 aa13.56□□□□□ -0.24
SPIDR-201ENST00000297423 SLC29A4Q7RTT9 530 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms