RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 RPS11P62280 158 aaKnown RBP eCLIP18.8■□□□□ 0.6
YBX3-202ENST00000279550 RPL22L1Q6P5R6 122 aaKnown RBP18.8■□□□□ 0.6
YBX3-202ENST00000279550 DDIT4LQ96D03 193 aa18.8■□□□□ 0.6
YBX3-202ENST00000279550 ADAD1Q96M93 576 aaKnown RBP18.8■□□□□ 0.6
YBX3-202ENST00000279550 VSX1Q9NZR4 365 aaPredicted RBP18.8■□□□□ 0.6
YBX3-202ENST00000279550 MRM2Q9UI43 246 aaKnown RBP18.8■□□□□ 0.6
YBX3-202ENST00000279550 TRAPPC4Q9Y296 219 aa18.8■□□□□ 0.6
YBX3-202ENST00000279550 MSRB2Q9Y3D2 182 aa18.8■□□□□ 0.6
YBX3-202ENST00000279550 A0A087WV48 116 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 IGLV1-36A0A0B4J1U3 117 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 OPN1LWP04000 364 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 NANOS3P60323 173 aaKnown RBP18.79■□□□□ 0.6
YBX3-202ENST00000279550 PUDPQ08623 228 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 ZP4Q12836 540 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 TMEM81Q6P7N7 255 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 H1FNTQ75WM6 255 aaPredicted RBP18.79■□□□□ 0.6
YBX3-202ENST00000279550 BEST3Q8N1M1 668 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 OR4K17Q8NGC6 315 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 OR6N2Q8NGY6 317 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 RPS4Y2Q8TD47 263 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 PAQR8Q8TEZ7 354 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 KCNE4Q8WWG9 221 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 MRPL48Q96GC5 212 aaKnown RBP18.79■□□□□ 0.6
YBX3-202ENST00000279550 SNX18Q96RF0 628 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 POTEKPQ9BYX7 375 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 SH2D2AQ9NP31 389 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 CHST11Q9NPF2 352 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 TBCCD1Q9NVR7 557 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 C14orf119Q9NWQ9 140 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 STMN3Q9NZ72 180 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 COMMD3Q9UBI1 195 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 ING1Q9UK53 422 aaPredicted RBP18.79■□□□□ 0.6
YBX3-202ENST00000279550 UGT2A1Q9Y4X1 527 aa18.79■□□□□ 0.6
YBX3-202ENST00000279550 SLC22A23A1A5C7 686 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 ARGFXA6NJG6 315 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 PFDN1O60925 122 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 ABHD16AO95870 558 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 CCL3P10147 92 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 SNTA1Q13424 505 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 SCAIQ8N9R8 606 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 AP3S1Q92572 193 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 SGCZQ96LD1 299 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 FRMD6Q96NE9 622 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 AMELYQ99218 206 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 PDCD1LG2Q9BQ51 273 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 TMEM185BQ9H7F4 350 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 PROK2Q9HC23 129 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 ANKRD10Q9NXR5 420 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 FKBP7Q9Y680 259 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 CFAP47Q6ZTR5 3102 aa18.78■□□□□ 0.6
YBX3-202ENST00000279550 A0A0G2JK05 382 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 TRBV2A0A0J9YWF9 115 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 ISPDA4D126 451 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 ZNF891A8MT65 544 aaPredicted RBP18.77■□□□□ 0.6
YBX3-202ENST00000279550 SLC16A7O60669 478 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 HPGDSO60760 199 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 CTLA4P16410 223 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 AZGP1P25311 298 aaKnown RBP18.77■□□□□ 0.6
YBX3-202ENST00000279550 OR10A3P58181 314 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 MADCAM1Q13477 382 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 ETFDHQ16134 617 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 DDI2Q5TDH0 399 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 ABHD17BQ5VST6 288 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 GALNT16Q8N428 558 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 MS4A15Q8N5U1 240 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 ZNF248Q8NDW4 579 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 ASB10Q8WXI3 467 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 HSD17B8Q92506 261 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 NTNG2Q96CW9 530 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 KLHL15Q96M94 604 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 INTS14Q96SY0 518 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 SRRQ9GZT4 340 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 TSPAN10Q9H1Z9 355 aaPredicted RBP18.77■□□□□ 0.6
YBX3-202ENST00000279550 EML6Q6ZMW3 1958 aa18.77■□□□□ 0.6
YBX3-202ENST00000279550 G3V3Y1 287 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 TLX3O43711 291 aaPredicted RBP18.77■□□□□ 0.59
YBX3-202ENST00000279550 TRIM3O75382 744 aaPredicted RBP18.77■□□□□ 0.59
YBX3-202ENST00000279550 UPK3AO75631 287 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 CD1AP06126 327 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 SPNP16150 400 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 CDC20Q12834 499 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 MYBPHQ13203 477 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 MFSD13AQ14CX5 517 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 CCDC58Q4VC31 144 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 SLC22A10Q63ZE4 541 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 DPY19L4Q7Z388 723 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 MINDY2Q8NBR6 621 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 SNRNP27Q8WVK2 155 aaKnown RBP18.77■□□□□ 0.59
YBX3-202ENST00000279550 RGP1Q92546 391 aaPredicted RBP18.77■□□□□ 0.59
YBX3-202ENST00000279550 UBL7Q96S82 380 aaPredicted RBP18.77■□□□□ 0.59
YBX3-202ENST00000279550 CCDC32Q9BV29 185 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 MRPL22Q9NWU5 206 aaKnown RBP18.77■□□□□ 0.59
YBX3-202ENST00000279550 ALKBH4Q9NXW9 302 aa18.77■□□□□ 0.59
YBX3-202ENST00000279550 AKAP13Q12802 2813 aa18.76■□□□□ 0.59
YBX3-202ENST00000279550 ZFHX4Q86UP3 3567 aa18.76■□□□□ 0.59
YBX3-202ENST00000279550 ALPK2Q86TB3 2170 aa18.76■□□□□ 0.59
YBX3-202ENST00000279550 A0A1W2PPK0 400 aa18.76■□□□□ 0.59
YBX3-202ENST00000279550 KLK10O43240 276 aa18.76■□□□□ 0.59
YBX3-202ENST00000279550 FZD7O75084 574 aa18.76■□□□□ 0.59
YBX3-202ENST00000279550 RPP14O95059 124 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms