RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MRPS10P82664 201 aaKnown RBP12.52□□□□□ -0.41
NPC1-201ENST00000269228 LRRC28Q86X40 367 aaPredicted RBP12.52□□□□□ -0.41
NPC1-201ENST00000269228 ARIH2OSQ8N7S6 290 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 SCGB1C1Q8TD33 95 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 PSMF1Q92530 271 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 MRGPRX4Q96LA9 322 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 CENPOQ9BU64 300 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 TXNL4BQ9NX01 149 aaKnown RBP12.52□□□□□ -0.41
NPC1-201ENST00000269228 IGHV3-15A0A0B4J1V0 119 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 PRAMEF4O60810 478 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 IL2RAP01589 272 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 SBK2P0C263 348 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 AKAIN1P0CW23 69 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 SDHAP31040 664 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 CXADRP78310 365 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 MPEG1Q2M385 716 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 CD163Q86VB7 1156 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 C7orf34Q96L11 122 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 ZNF226Q9NYT6 803 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 PARP14Q460N5 1801 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 FOXF1Q12946 379 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 CCDC58Q4VC31 144 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 HES3Q5TGS1 186 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 PWWP2BQ6NUJ5 590 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 RIMKLAQ8IXN7 391 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 SIPA1L1O43166 1804 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 BORCS7-ASMTA0A0B4J1R7 106 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 UPK1BO75841 260 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 HTR2CP28335 458 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 MRPL19P49406 292 aaKnown RBP12.51□□□□□ -0.41
NPC1-201ENST00000269228 VEGFCP49767 419 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 ISL1P61371 349 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 AGERQ15109 404 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 BHLHE23Q8NDY6 225 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 KCNE4Q8WWG9 221 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 RAB9BQ9NP90 201 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 CMC2Q9NRP2 79 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 AGAP14A8MT82 685 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 TNFSF14O43557 240 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 CBR3O75828 277 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 PTTG1O95997 202 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 WNT11O96014 354 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 HCCSP53701 268 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 SLC46A3Q7Z3Q1 461 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 OR6V1Q8N148 313 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 OR2L13Q8N349 312 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 TCEAL3Q969E4 200 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 ASH2LQ9UBL3 628 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 UBCP0CG48 685 aaKnown RBP12.51□□□□□ -0.41
NPC1-201ENST00000269228 MSR1P21757 451 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 ABCD3P28288 659 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 DUSP2Q05923 314 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 OR52N1Q8NH53 320 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 TSSK2Q96PF2 358 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 CMSS1Q9BQ75 279 aaKnown RBP12.51□□□□□ -0.41
NPC1-201ENST00000269228 TMEM59Q9BXS4 323 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 TREM1Q9NP99 234 aa12.51□□□□□ -0.41
NPC1-201ENST00000269228 MRPS28Q9Y2Q9 187 aaKnown RBP12.51□□□□□ -0.41
NPC1-201ENST00000269228 A0A0A6YYH2 397 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 A6NJ64 397 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 I3L521 148 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 LIPCP11150 499 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 SF3A2Q15428 464 aaKnown RBP12.5□□□□□ -0.41
NPC1-201ENST00000269228 CORO6Q6QEF8 472 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 PIGTQ969N2 578 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 MBOAT4Q96T53 435 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 PDCD1LG2Q9BQ51 273 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 MMP28Q9H239 520 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 LANCL2Q9NS86 450 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 KLK4Q9Y5K2 254 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 ASPDHA6ND91 283 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 ARPC1BO15143 372 aaKnown RBP12.5□□□□□ -0.41
NPC1-201ENST00000269228 ATG12O94817 140 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 SERPINE2P07093 398 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 RAB40ALP0C0E4 278 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 SPI1P17947 270 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 EPHA1P21709 976 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 WNT3P56703 355 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 FAPQ12884 760 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 IKZF1Q13422 519 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 SGPP2Q8IWX5 399 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 PHC2Q8IXK0 858 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 OR11L1Q8NGX0 322 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 RAB40AQ8WXH6 277 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
NPC1-201ENST00000269228 HSPB6O14558 160 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 TNFSF11O14788 317 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 GRB2P62993 217 aaKnown RBP12.5□□□□□ -0.41
NPC1-201ENST00000269228 GPR176Q14439 515 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 TBC1D28Q2M2D7 210 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 ZNF425Q6IV72 752 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 BORAQ6PGQ7 559 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 PGAP1Q75T13 922 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 OVCH1Q7RTY7 1134 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 TMEM179BQ7Z7N9 219 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 TMEM99Q8N816 258 aa12.5□□□□□ -0.41
NPC1-201ENST00000269228 CHPT1Q8WUD6 406 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms