RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 AK1P00568 194 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 CCL3P10147 92 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 ITGA3P26006 1051 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 ATXN7L3Q14CW9 347 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-201ENST00000258607 SPINK14Q6IE38 97 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 SLC25A25Q6KCM7 469 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 ANKRD37Q7Z713 158 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 NAA40Q86UY6 237 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 ADGRG3Q86Y34 549 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 CADM4Q8NFZ8 388 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 MAFIPQ8WZ33 124 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 ROBO4Q8WZ75 1007 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 INTS14Q96SY0 518 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 C14orf105Q9NVL8 296 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 TMEM129A0AVI4 362 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 VSTM2BA6NLU5 285 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF814B7Z6K7 855 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 C9J4A7 227 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 LYPD3O95274 346 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 HLA-DMAP28067 261 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 MAP2K3P46734 347 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 GABRA4P48169 554 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 AGFG1P52594 562 aaKnown RBP8.2□□□□□ -1.1
CKAP2-201ENST00000258607 C11orf91Q3C1V1 193 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 MAMDC2Q7Z304 686 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-201ENST00000258607 CCDC190Q86UF4 302 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 RTN4RL2Q86UN3 420 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 TOMM5Q8N4H5 51 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 SLC26A10Q8NG04 563 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 OR13C9Q8NGT0 318 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 OR10K1Q8NGX5 313 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 FAM131CQ96AQ9 280 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 GPER1Q99527 375 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 THAP7Q9BT49 309 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-201ENST00000258607 SRRQ9GZT4 340 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 ASH2LQ9UBL3 628 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 CHRNA9Q9UGM1 479 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 SPATA2Q9UM82 520 aa8.2□□□□□ -1.1
CKAP2-201ENST00000258607 TRAV18A0A075B6X5 111 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 A0A0G2JMM0 328 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 A0A1W2PPB8 328 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 A0A1W2PRS3 328 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 TCRBV16S1A1N1A0A5B0 115 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 FAM172BPA6NC97 362 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 KIR3DP1A8MWS1 328 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 SULT2B1O00204 365 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 LYRM1O43325 122 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 PTP4A3O75365 173 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 SIX6O95475 246 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 IL33O95760 270 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 PNPP00491 289 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 EDN3P14138 238 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 RFX2P48378 723 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ACY1Q03154 408 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 MFGE8Q08431 387 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 TPBGQ13641 420 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 SGCBQ16585 318 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 LIN54Q6MZP7 749 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ATG4DQ86TL0 474 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 RBM12BQ8IXT5 1001 aaKnown RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 D2HGDHQ8N465 521 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 APCDD1LQ8NCL9 501 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 OR14L1PQ8NHC6 308 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ADIPOR1Q96A54 375 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ALKBH3Q96Q83 286 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 TMEM138Q9NPI0 162 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 SF3B6Q9Y3B4 125 aaKnown RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 NSG1A0A0A6YYJ2 146 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 A0A1W2PR80 420 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 FAM25EA8MYX2 175 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 RER1O15258 196 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 CCL2P13500 99 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 NPR2P20594 1047 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 CLDN17P56750 224 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 CLRN1P58418 232 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 STARD6P59095 220 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 CBFBQ13951 182 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 NTRK2Q16620 822 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 TMEM201Q5SNT2 666 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 MZT2AQ6P582 158 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 COX15Q7KZN9 410 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 CPEB2Q7Z5Q1 589 aaKnown RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 SYNPRQ8TBG9 265 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 SAP25Q8TEE9 199 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 LMF2Q9BU23 707 aaKnown RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 NEK6Q9HC98 313 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 COQ3Q9NZJ6 369 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF221Q9UK13 617 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 SLC5A6Q9Y289 635 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 USF3Q68DE3 2245 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ARRDC5A6NEK1 342 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 PLA2G10O15496 165 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 KLF4O43474 513 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 AKR7A2O43488 359 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 KRT33AO76009 404 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 PNMTP11086 282 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 PIPP12273 146 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 CASP3P42574 277 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 EFNB2P52799 333 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 MYBPHQ13203 477 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms