RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Il2rgP34902 369 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ccr2P51683 373 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 HlxQ61670 476 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Impad1Q80V26 356 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 CblcQ80XL1 496 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Pcyt1bQ811Q9 369 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Slc31a1Q8K211 196 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ccdc59Q8R2N0 240 aaKnown RBP19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr788Q8VFI0 311 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 CytipQ91VY6 359 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Sdf2Q9DCT5 211 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Loxl3Q9Z175 754 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fam90a1aA2A4E2 429 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Abcd3P55096 659 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 FapP97321 761 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Isg20l2Q3U1G5 368 aaKnown RBP19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fam160a2Q3U2I3 975 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Pgap1Q3UUQ7 922 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Med22Q62276 200 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Q80UB0 333 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ugt2b37Q8VCN3 530 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Calhm2Q8VEC4 323 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr378Q8VGT2 314 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tspan31Q9CQ88 210 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ier3ip1Q9CR20 82 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tpk1Q9R0M5 243 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Dock10Q8BZN6 2150 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ighv1-54A0A075B5W5 117 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr1097A2AVA9 315 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Zfp735B1ARH2 734 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Btbd8D3YUB6 377 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gm44G3UW88 330 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Vmn2r89O35199 507 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tcea1P10711 301 aaKnown RBP19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 VtnP29788 478 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Atp6v1e1P50518 226 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Rps7P62082 194 aaKnown RBP19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gch1Q05915 241 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Myl12bQ3THE2 172 aaKnown RBP19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gm136Q3V037 328 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Coq8bQ566J8 533 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 SrmsQ62270 496 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tas2r117Q7M715 330 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fam180aQ8BR21 173 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fbxw19Q8C2W8 466 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr1284Q8VF29 311 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr166Q8VGX2 312 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ifitm3Q9CQW9 137 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Zbtb8aQ9CWH1 434 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Hspb11Q9D6H2 143 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Krt81Q9ERE2 481 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Vstm2bQ9JME9 285 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Eml6Q5SQM0 1958 aa19.1■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Arid1aA2BH40 2283 aaKnown RBP19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gm16432A0A0A6YXX9 775 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Kiaa1324A2AFS3 1009 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gm13102A2ASJ3 519 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr1056A2AVY0 313 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Vmn1r12G5E8G1 307 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Alx4O35137 399 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 C1dO35473 141 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Eif1P48024 113 aaKnown RBP19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fam169aQ5XG69 665 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Dvl3Q61062 716 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Spin1Q61142 262 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Lefty1Q64280 368 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Il11ra1Q64385 432 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 DraxinQ6PAL1 343 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fbll1Q80WS3 314 aaKnown RBP19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Katnb1Q8BG40 658 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 UstQ8BUB6 407 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 TbceQ8CIV8 524 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Nt5dc2Q91X76 390 aaKnown RBP19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Nmd3Q99L48 503 aaKnown RBP19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Cdca5Q9CPY3 264 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Cln8Q9QUK3 288 aa19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Trip12G5E870 2025 aaKnown RBP19.09■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr1366A0A1W2P740 328 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Matn3O35701 481 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Lsm2O35900 95 aaKnown RBP19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 H2-LP01897 362 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Etv1P41164 477 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tead3P70210 439 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Pitx2P97474 317 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Slc22a14Q497L9 629 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Zdhhc8Q5Y5T5 762 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tssk1bQ61241 365 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Zfp9Q8BIS1 454 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fam120cQ8C3F2 1091 aaKnown RBP19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Plac9Q8K262 108 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Mterf3Q8R3J4 412 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tsen15Q8R3W5 168 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr1461Q8VEV7 312 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr1020Q8VFK7 317 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr686Q8VGX3 317 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Sectm1aQ921W8 192 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Slco1a6Q99J94 670 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Etv5Q9CXC9 510 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 CenpvQ9CXS4 252 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Q9D1K7 174 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms