RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Saxo1B1AXP3 476 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Vmn2r101E9PZS9 857 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Tmem178bM0QWJ9 172 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Dlx5P70396 289 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Foxred1Q3TQB2 487 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Fut10Q5F2L2 481 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Kremen2Q8K1S7 461 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Tmem185bQ8R3R5 350 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Vmn1r42Q8VBS7 329 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Asb15Q8VHS6 583 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Lcn8Q924P3 175 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Ubox5Q925F4 539 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Efcab11Q9D0E5 162 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Lingo1Q9D1T0 614 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Ceacam20Q9D2Z1 577 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Slc9a3r2Q9JHL1 337 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Ptdss2Q9Z1X2 473 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 Gm17087V9GXQ2 156 aa13.71□□□□□ -0.21
Nup54-201ENSMUST00000038514 PrnA0A075B668 197 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr1493-ps1A0A140LHU2 316 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr110A2RT31 317 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Zfp599E9PWP1 548 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn1r91E9PZR7 307 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 C2cd6E9Q152 557 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Zfp395E9Q5N9 508 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 St8sia2O35696 375 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 FxnO35943 207 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Il9P15247 144 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Csrp2P97314 193 aaKnown RBP13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn1r11Q3SXA2 299 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 ScimpQ3UU41 150 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn1r196Q5SVD5 301 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Prtn3Q61096 254 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Zfp82Q6P9Y7 530 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr1031Q7TR87 336 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr111Q7TRK1 317 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gpr137Q80ZU9 396 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Dzank1Q8C008 778 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Cd177Q8R2S8 817 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr1484Q8VEU6 315 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Exosc4Q921I9 245 aaKnown RBP13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Mrm1Q99J25 320 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Slco1a6Q99J94 670 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Slc24a3Q99PD7 645 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Cops7aQ9CZ04 275 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Pmepa1Q9D7R2 260 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Entpd4Q9DBT4 613 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 PrndQ9QUG3 179 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Dmrt1Q9QZ59 374 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Kcne4Q9WTW3 170 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 TfecQ9WTW4 317 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr545Q9WU94 316 aa13.71□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gm3952A0A0A6YXJ1 191 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Slc23a4A0A0J9YUX7 615 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gm28729A0A1B0GSW2 409 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Aadacl3A2A7Z8 408 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr1338A2ACY7 313 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Tmsb15aA2AEH9 79 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr1224-ps1A3KGY4 311 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Slc38a6G3UVW3 457 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn2r99H3BK37 856 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Emc8O70378 207 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Mid1O70583 680 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Dll3O88516 592 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 AanatO88816 205 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Hdac3O88895 424 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 CtslP06797 334 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Crisp2P16563 243 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Il13P20109 131 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 AcheP21836 614 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Hoxa10P31310 416 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Clec10aP49300 304 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Rap2bP61226 183 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Tgif1P70284 272 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 ptchd1Q14B62 888 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 MffQ6PCP5 291 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Kiaa0895Q7TQE7 519 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr1349Q7TQV1 317 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr1321Q7TQW4 319 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Kansl1Q80TG1 1036 aaKnown RBP13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr998Q8VF76 314 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Q9CQT6 229 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Ccdc167Q9D162 97 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Rpl22l1Q9D7S7 122 aaKnown RBP13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Tmem41aQ9D8U2 264 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Mrps15Q9DC71 258 aaKnown RBP13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Klhl1Q9JI74 751 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Psma6Q9QUM9 246 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Nckap5E9QAE1 1909 aa13.7□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr634-ps1A0A1B0GRN7 318 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gm9008E9PVG0 424 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn2r41E9Q5C7 852 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn2r48E9Q5D8 855 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn2r40F6W043 852 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn2r36K7N741 852 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Slc30a4O35149 430 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Fgf3P05524 245 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Slc11a1P41251 548 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Ttyh2Q3TH73 532 aa13.69□□□□□ -0.22
Nup54-201ENSMUST00000038514 Rnf180Q3U827 592 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms