RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Hacd4A2AKM2 232 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Igh-1aP01865 398 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Dnmt3cP0DOY1 709 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 PfkmP47857 780 aaKnown RBP13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1252Q7TQZ2 314 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Fbxo34Q80XI1 695 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Sec22aQ8BH47 307 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 AtcayQ8BHE3 372 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Agfg1Q8K2K6 561 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Slc7a13Q91WN3 478 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Lcn8Q924P3 175 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 EsamQ925F2 394 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Mpped2Q9CZJ0 294 aa13.05□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr740E9PV79 311 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Hnrnpa2b1O88569 353 aaKnown RBP13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Il13P20109 131 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Rce1P57791 329 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Arntl2Q2VPD4 579 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Slc6a5Q761V0 799 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gm21854A0A087WNM4 232 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr663A0A1B0GSI9 319 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Srp9P49962 86 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Slc35f3Q1LZI2 421 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Hspb6Q5EBG6 162 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Usf1Q61069 310 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tmem130Q6NXM3 419 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Q80W69 301 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Enpp6Q8BGN3 440 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Klhdc8aQ91XA8 350 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Rab5aQ9CQD1 215 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Zmat5Q9CQR5 170 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Syt13Q9EQT6 426 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Scn8aQ9WTU3 1978 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gm15446D3Z5Y8 553 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Mmp7Q10738 264 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Znf689Q8BKK5 500 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr315Q8VFG7 309 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr830Q8VFJ5 315 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Emid1Q91VF5 444 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Mrpl13Q9D1P0 178 aaKnown RBP13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Phf6Q9D4J7 364 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1160A2AVT0 319 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn2r66K7N6R9 851 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn2r109K7N747 858 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Bpifa2P07743 235 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1128Q7TR47 311 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Slc5a8Q8BYF6 611 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Subh2bvQ9D9Z7 123 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 P2ry14Q9ESG6 338 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 4930444P10RikD3YUR1 185 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn2r96E9PZU5 664 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Mrpl22Q8BU88 206 aaKnown RBP13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tmem198bQ8CFU0 350 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Lgi4Q8K1S1 537 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr676Q8VGZ9 317 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tas2r103Q9JKA3 312 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn1r9A2RST7 299 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr66F8VQ01 311 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Fli1P26323 452 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Fabp2P55050 132 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Elfn2Q68FM6 823 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1386Q7TQT0 309 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Ankrd46Q8BTZ5 228 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr734Q8VFT4 313 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Q91V76 315 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn1r10W4VSP8 311 aa13.04□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1223A0A1L1SU13 311 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 D7Ertd443eD2J0Y4 644 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr237-ps1K9J725 310 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Capns1O88456 269 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Trp53rkaQ5U452 244 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Kiss1Q6Y4S4 130 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1417Q8VGJ6 315 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Slc39a8Q91W10 462 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 AldobQ91Y97 364 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tp53rkQ99PW4 244 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Adamdec1Q9R0X2 467 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Fndc10A2A9Q0 223 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Usp36B1AQJ2 1098 aaKnown RBP13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 H3f3cP02301 136 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 H3f3aP84244 136 aaKnown RBP13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gm853Q3UNZ2 425 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tmem163Q8C996 288 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Nsun5Q8K4F6 465 aaKnown RBP13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Zdhhc7Q91WU6 308 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr642Q924X8 314 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Nme1P15532 152 aaKnown RBP13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gabra2P26048 451 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 RidaP52760 135 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Slc30a3P97441 388 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gpr157Q8C206 330 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn1r220Q8R272 298 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1208Q8VG47 308 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Ndrg2Q9QYG0 371 aaKnown RBP13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Ttc3O88196 1979 aaKnown RBP13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1432A0A140LHS7 346 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 BC051665E9Q623 330 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Il1r2P27931 410 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Sstr4P49660 385 aa13.03□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Wdr5P61965 334 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 109.1 ms