RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 HS3ST5Q8IZT8 346 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ARIH2OSQ8N7S6 290 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 CNEP1R1Q8N9A8 125 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ZIC4Q8N9L1 334 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 SCAIQ8N9R8 606 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ADPRHL1Q8NDY3 354 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 OR9Q2Q8NGE9 314 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 PYDC1Q8WXC3 89 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 AKAP1Q92667 903 aaKnown RBP eCLIP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 POP5Q969H6 163 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 BPIFA2Q96DR5 249 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 SGTBQ96EQ0 304 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 DUS3LQ96G46 650 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 PLPPR2Q96GM1 343 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 GMPPAQ96IJ6 420 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 HS6ST2Q96MM7 605 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 RAB3IPQ96QF0 476 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 PLA2G12AQ9BZM1 189 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 KLHL4Q9C0H6 718 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 CXorf56Q9H5V9 222 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ESRP2Q9H6T0 727 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 BCO1Q9HAY6 547 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 NTN4Q9HB63 628 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 MRPL39Q9NYK5 338 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 KLHL9Q9P2J3 617 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF229Q9UJW7 825 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 GDF2Q9UK05 429 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 CDC42EP3Q9UKI2 254 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 SAMHD1Q9Y3Z3 626 aaKnown RBP6.5□□□□□ -1.37
PHGDH-225ENST00000641720 CORINQ9Y5Q5 1042 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 FLVCR1Q9Y5Y0 555 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 U3KQV3 271 aa6.5□□□□□ -1.37
PHGDH-225ENST00000641720 DNAH3Q8TD57 4116 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 TRAV27A0A087WT01 109 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 SLC35F4A4IF30 521 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF724A8MTY0 619 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 EFCAB9A8MZ26 197 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 C11orf98E9PRG8 122 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 MS4A18H0YCH9 400 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 SERPINI2O75830 405 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 SMNDC1O75940 238 aaKnown RBP eCLIP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 CST1P01037 141 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 TSPAN19P0C672 248 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 SAGP10523 405 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 AQP2P41181 271 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 SMIM11AP58511 58 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 FXYD6P3P58550 94 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 POU3F1Q03052 451 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 RPL18Q07020 188 aaKnown RBP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 LGALS3BPQ08380 585 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 LOXL1Q08397 574 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 PMS2P3Q13401 168 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 MFSD13AQ14CX5 517 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 PDK3Q15120 406 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 ATP6AP1Q15904 470 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 MS4A18Q3C1V0 323 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 C11orf71Q6IPW1 123 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 NHLRC1Q6VVB1 395 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 H1FNTQ75WM6 255 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 FAM214BQ7L5A3 538 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 ZER1Q7Z7L7 766 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 GPAT4Q86UL3 456 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 IGFN1Q86VF2 1251 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 EPHX4Q8IUS5 362 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 SLC43A2Q8N370 569 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 OR6K3Q8NGY3 331 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 OR5J2Q8NH18 312 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 LIPHQ8WWY8 451 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 ZNF385AQ96PM9 386 aaKnown RBP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 NAA11Q9BSU3 229 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 TRAF4Q9BUZ4 470 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-225ENST00000641720 ASPNQ9BXN1 380 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 GRIP2Q9C0E4 1043 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 REEP1Q9H902 201 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 NANSQ9NR45 359 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 ARMC1Q9NVT9 282 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 TAS2R5Q9NYW4 299 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 EMC3Q9P0I2 261 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 DNAJB9Q9UBS3 223 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 RASD1Q9Y272 281 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 B3GALT5Q9Y2C3 310 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 EMC9Q9Y3B6 208 aa6.49□□□□□ -1.37
PHGDH-225ENST00000641720 CLOCKO15516 846 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 OR10H3O60404 316 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 KRT36O76013 467 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 CCNB2O95067 398 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 IGHV3-9P01782 118 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 F13BP05160 661 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 YES1P07947 543 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 ADORA3P0DMS8 318 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 IGHV4-31P0DP07 118 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 HOXB6P17509 224 aaKnown RBP6.48□□□□□ -1.37
PHGDH-225ENST00000641720 EGR1P18146 543 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 AHCYP23526 432 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 FPR3P25089 353 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 GSSP48637 474 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 SELENOPP49908 381 aa6.48□□□□□ -1.37
PHGDH-225ENST00000641720 HMGA2P52926 109 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms