RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 VNN1O95497 513 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 HOXA10P31260 410 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-227ENST00000638011 MTCP1P56278 107 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 TMEM43Q9BTV4 400 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 G3V2L1 256 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 RRASP10301 218 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 LAMP1P11279 417 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 PIN1Q13526 163 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-227ENST00000638011 Q6ZTK2 550 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 MISPQ8IVT2 679 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 DDOQ99489 341 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 NUDT22Q9BRQ3 303 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 C4BP0C0L5 1744 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 STAG3L3P0CL85 134 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 PTHLHP12272 177 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 DEFA4P12838 97 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 ZNF93P35789 620 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-227ENST00000638011 WNT7BP56706 349 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 CLPPQ16740 277 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-227ENST00000638011 CLLU1Q5K131 121 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 SLC39A11Q8N1S5 342 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 OR4D10Q8NGI6 311 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 SCAMP5Q8TAC9 235 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 PINX1Q96BK5 328 aaKnown RBP14.04□□□□□ -0.16
UBE3A-227ENST00000638011 KCNK12Q9HB15 430 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 FLVCR2Q9UPI3 526 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 GPR31O00270 319 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 FUT1P19526 365 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 FAM110CQ1W6H9 321 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 SYPL2Q5VXT5 272 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 FIBINQ8TAL6 211 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 DCAF16Q9NXF7 216 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 PCDHGA9Q9Y5G4 932 aaKnown RBP14.04□□□□□ -0.16
UBE3A-227ENST00000638011 GPR45Q9Y5Y3 372 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 CNMDO75829 334 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 HMGB4Q8WW32 186 aa14.04□□□□□ -0.16
UBE3A-227ENST00000638011 APOBEC3GQ9HC16 384 aaKnown RBP14.04□□□□□ -0.16
UBE3A-227ENST00000638011 ISCA2Q86U28 154 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 PTRH1Q86Y79 214 aaKnown RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 FAM71F1Q96KD3 344 aaPredicted RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 VSX1Q9NZR4 365 aaPredicted RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 TMEM131LA2VDJ0 1609 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 RPLP1P05386 114 aaKnown RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 IL1RNP18510 177 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 PNRC1Q12796 327 aaPredicted RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 PXYLP1Q8TE99 480 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 SECTM1Q8WVN6 248 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 ST8SIA2Q92186 375 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 MRGPRX2Q96LB1 330 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 NSUN5Q96P11 429 aaKnown RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 MEIS3P1A6NDR6 274 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 LDB2O43679 373 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 AQP8O94778 261 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 EPHA5P54756 1037 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 DPPA4Q7L190 304 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 TMEM217Q8N7C4 229 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 ZNF768Q9H5H4 540 aaKnown RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 MROH1Q8NDA8 1641 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 TMEM221A6NGB7 291 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 NPIPB15A6NHN6 443 aaPredicted RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 PKIAP61925 76 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 SLC46A1Q96NT5 459 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 C20orf24Q9BUV8 137 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 JAM3Q9BX67 310 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 RAB6CQ9H0N0 254 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 CTU2Q2VPK5 515 aaKnown RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 ZC3H3Q8IXZ2 948 aaKnown RBP14.03□□□□□ -0.16
UBE3A-227ENST00000638011 PQLC3Q8N755 202 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 CREB3L4Q8TEY5 395 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 PXDNQ92626 1479 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 GDI1P31150 447 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 Q6ZVU0 165 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 SPRED1Q7Z699 444 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 SH3RF2Q8TEC5 729 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 SMOQ99835 787 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 FAM183AA6NL82 134 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 SPINT2O43291 252 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 CDONQ4KMG0 1287 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 FAM180BQ6P0A1 224 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 TOMM20LQ6UXN7 152 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 CBLL1Q75N03 491 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 SLAIN1Q8ND83 568 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 EDAQ92838 391 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 NGBQ9NPG2 151 aa14.03□□□□□ -0.16
UBE3A-227ENST00000638011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.03□□□□□ -0.163e-9■■■■■ 30.4
UBE3A-227ENST00000638011 IGFBP1P08833 259 aaPredicted RBP14.02□□□□□ -0.16
UBE3A-227ENST00000638011 PADI1Q9ULC6 663 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 KCNQ2O43526 872 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 GPX3P22352 226 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 NKX2-1P43699 371 aaPredicted RBP14.02□□□□□ -0.16
UBE3A-227ENST00000638011 TREML2Q5T2D2 321 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 H2BFWTQ7Z2G1 175 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 FAM3DQ96BQ1 224 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 FGFBP2Q9BYJ0 223 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 NKX2-4Q9H2Z4 354 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 PCDHGA1Q9Y5H4 931 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 GLTPD2A6NH11 291 aa14.02□□□□□ -0.16
UBE3A-227ENST00000638011 RNASEK-C17orf49H0YIS7 233 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms