RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 ZNF724A8MTY0 619 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 C1QTNF9BB2RNN3 333 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 B4DXG7 233 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 ZNF670-ZNF695F2Z2N8 137 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 WDR1O75083 606 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 MRPL33O75394 65 aaKnown RBP9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 C1QTNF9P0C862 333 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 SPI1P17947 270 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 GSTT1P30711 240 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 SLC15A1P46059 708 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 CSNK1A1P48729 337 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 CD97P48960 835 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 NUDT6P53370 316 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 MLLT10P55197 1068 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 CASP6P55212 293 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 SH3BGRP55822 239 aaPredicted RBP9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 CLDN17P56750 224 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 CLDN18P56856 261 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 CLDN20P56880 219 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 KLRB1Q12918 225 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 SLC17A1Q14916 467 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 STK11Q15831 433 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 MESTQ5EB52 335 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 ABLIM2Q6H8Q1 611 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 KCTD18Q6PI47 426 aaPredicted RBP9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 KCTD8Q6ZWB6 473 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 CREB3L2Q70SY1 520 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 AAED1Q7RTV5 226 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 FAM220AQ7Z4H9 259 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 ZBTB46Q86UZ6 589 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 SPARTQ8N0X7 666 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 GPR137CQ8N3F9 429 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 NOXO1Q8NFA2 376 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 OR9K2Q8NGE7 335 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 ASB17Q8WXJ9 295 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 UBE2FQ969M7 185 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 TMEM45BQ96B21 275 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 RASD2Q96D21 266 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 GPR137Q96N19 417 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 ZFP3Q96NJ6 502 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 TIMP4Q99727 224 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 NPAS1Q99742 590 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 TM9SF2Q99805 663 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 WACQ9BTA9 647 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 CDADC1Q9BWV3 514 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 YIPF3Q9GZM5 350 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 PRDM14Q9GZV8 571 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 TSPAN10Q9H1Z9 355 aaPredicted RBP9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 SYT4Q9H2B2 425 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 KCNN2Q9H2S1 579 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 NOSIPQ9Y314 301 aaKnown RBP9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 EMC9Q9Y3B6 208 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 HRH3Q9Y5N1 445 aa9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 URB1O60287 2271 aaKnown RBP9.06□□□□□ -0.96
FOXCUT-201ENST00000628509 MYO15AQ9UKN7 3530 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 IGKV3D-15A0A087WSY6 115 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 TMEM129A0AVI4 362 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SLC22A23A1A5C7 686 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SLC35F4A4IF30 521 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SLC22A20A6NK97 555 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 FAM183AA6NL82 134 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 TRIM64CA6NLI5 447 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 ZNF99A8MXY4 864 aaPredicted RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SMAD9O15198 467 aaKnown RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SLC16A7O60669 478 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 TRMUO75648 421 aaKnown RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 OPN1LWP04000 364 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 HRGP04196 525 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SBK2P0C263 348 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 JUNBP17275 347 aaPredicted RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 NPR2P20594 1047 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SHC1P29353 583 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 CDKN2AP42771 156 aaKnown RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 STARP49675 285 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SMN1Q16637 294 aaKnown RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 GXYLT1Q4G148 440 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 RIPPLY2Q5TAB7 128 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 PLEKHG7Q6ZR37 379 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SLC16A9Q7RTY1 509 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 GLB1L2Q8IW92 636 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 RBMXL3Q8N7X1 1067 aaKnown RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 CYB561A3Q8NBI2 242 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 OR51G2Q8NGK0 314 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 RNF128Q8TEB7 428 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SNX33Q8WV41 574 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 PTP4A1Q93096 173 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 DNAJA3Q96EY1 480 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 GMPPAQ96IJ6 420 aaPredicted RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 INTS14Q96SY0 518 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 NMNAT2Q9BZQ4 307 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 ENKD1Q9H0I2 346 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 CALHM2Q9HA72 323 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 AMBNQ9NP70 447 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 ISYNA1Q9NPH2 558 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 ERVK-18Q9QC07 812 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 CAB39Q9Y376 341 aaPredicted RBP9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 COMMD3-BMI1R4GMX3 469 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 CNTRLQ7Z7A1 2325 aa9.05□□□□□ -0.96
FOXCUT-201ENST00000628509 PIEZO1Q92508 2521 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms