RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 OSMP13725 252 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 PPP3CBP16298 524 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 GABRB1P18505 474 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 PRKAR1BP31321 381 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 RPS5P46782 204 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 LIMS1P48059 325 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 IDH2P48735 452 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 RORCP51449 518 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 IST1P53990 364 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 VLDLRP98155 873 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 SRYQ05066 204 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 AQP6Q13520 282 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 GPR50Q13585 617 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CBFBQ13951 182 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 LARS2Q15031 903 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 DAZAP2Q15038 168 aaPredicted RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 RNPS1Q15287 305 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CCDC92Q53HC0 331 aaPredicted RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 ARMCX4Q5H9R4 360 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 POMZP3Q6PJE2 187 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CASP12Q6UXS9 341 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 PLEKHM3Q6ZWE6 761 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 VTCN1Q7Z7D3 282 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 DMRTC2Q8IXT2 367 aaPredicted RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF440Q8IYI8 595 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 MFSD4AQ8N468 514 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CLDN22Q8N7P3 220 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 C9orf106Q8NAJ2 232 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 NAXEQ8NCW5 288 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 OR6T1Q8NGN1 323 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CNIH3Q8TBE1 160 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 FAM222BQ8WU58 562 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 SMPDL3BQ92485 455 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 AP3S1Q92572 193 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 PROX1Q92786 737 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CPNE4Q96A23 557 aaPredicted RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 C3orf49Q96BT1 292 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 DNAJA3Q96EY1 480 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM80Q96HE8 168 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF845Q96IR2 970 aaPredicted RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 TPD52L3Q96J77 140 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 MRGPRX4Q96LA9 322 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CEP19Q96LK0 163 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 WDFY2Q96P53 400 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 MED18Q9BUE0 208 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 TRAF4Q9BUZ4 470 aaPredicted RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 MND1Q9BWT6 205 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 PINK1Q9BXM7 581 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 HDHD5Q9BXW7 423 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 SRXN1Q9BYN0 137 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 UCK2Q9BZX2 261 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 OR11A1Q9GZK7 315 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 POLR2J2Q9GZM3 115 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 NUAK2Q9H093 628 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 POLR2J3Q9H1A7 115 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 MCCC2Q9HCC0 563 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CTPS2Q9NRF8 586 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 JKAMPQ9P055 326 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CLCF1Q9UBD9 225 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 RABL2AQ9UBK7 228 aaPredicted RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 NDRG3Q9UGV2 375 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 MCTS1Q9ULC4 181 aaKnown RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 RABL2BQ9UNT1 228 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CAMK2AQ9UQM7 478 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CORINQ9Y5Q5 1042 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 HRNRQ86YZ3 2850 aaPredicted RBP4.69□□□□□ -1.66
SHMT1-211ENST00000618902 CADP27708 2225 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 ARHGAP21Q5T5U3 1957 aa4.69□□□□□ -1.66
SHMT1-211ENST00000618902 RTTNQ86VV8 2226 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 F8P00451 2351 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 hCG_2014768A0A024R1R8 64 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 TMED7-TICAM2A0A0A6YYA0 188 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ARPC4-TTLL3A0A0A6YYG9 625 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 A0A0G2JNJ9 132 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 IQCMA0A1B0GVH7 501 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 A0A1W2PRQ8 180 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM72A0PK05 275 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 FAM221AA4D161 298 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF814B7Z6K7 855 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 C3orf80F5H4A9 247 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 hCG_2039718K7EN88 272 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 TNFSF11O14788 317 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SEC14L5O43304 696 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 CXCL13O43927 109 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 RAMP1O60894 148 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 NPIPB7O75200 414 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 AQP8O94778 261 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 NUDT14O95848 222 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 IL1AP01583 271 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 MT-ND2P03891 347 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 PGCP20142 388 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 POU3F2P20265 443 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 PTNP21246 168 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 CBLP22681 906 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 EDNRAP25101 427 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 TACR3P29371 465 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 FMO3P31513 532 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SFTPDP35247 375 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 IDUAP35475 653 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 APOBEC1P41238 236 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms