RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 TMEM163Q8TC26 289 aa13.79□□□□□ -0.2
CCL3-206ENST00000614051 APH1BQ8WW43 257 aa13.79□□□□□ -0.2
CCL3-206ENST00000614051 OR2M2Q96R28 347 aa13.79□□□□□ -0.2
CCL3-206ENST00000614051 DDOQ99489 341 aa13.79□□□□□ -0.2
CCL3-206ENST00000614051 TP63Q9H3D4 680 aaPredicted RBP13.79□□□□□ -0.2
CCL3-206ENST00000614051 BCO1Q9HAY6 547 aa13.79□□□□□ -0.2
CCL3-206ENST00000614051 HINT3Q9NQE9 182 aaKnown RBP13.79□□□□□ -0.2
CCL3-206ENST00000614051 UBAP1Q9NZ09 502 aa13.79□□□□□ -0.2
CCL3-206ENST00000614051 FREM1Q5H8C1 2179 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 ZNF726A6NNF4 738 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 ZNF724A8MTY0 619 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 XKRYO14609 159 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 ZNF432O94892 652 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 TOXO94900 526 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 IFNGP01579 166 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 YES1P07947 543 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 CLUP10909 449 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 ZNF3P17036 446 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 FOXF2Q12947 444 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 MRPL49Q13405 166 aaKnown RBP13.78□□□□□ -0.2
CCL3-206ENST00000614051 SF3B4Q15427 424 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCL3-206ENST00000614051 GTF2IRD2BQ6EKJ0 949 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 NCCRP1Q6ZVX7 275 aaPredicted RBP13.78□□□□□ -0.2
CCL3-206ENST00000614051 AAED1Q7RTV5 226 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 THAP5Q7Z6K1 395 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 GTF2IRD2Q86UP8 949 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 SETD9Q8NE22 299 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 OR8J1Q8NGP2 316 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 OR9Q1Q8NGQ5 310 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 OR6X1Q8NH79 312 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 RHOXF1Q8NHV9 184 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 PTP4A1Q93096 173 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 INTS12Q96CB8 462 aaKnown RBP13.78□□□□□ -0.2
CCL3-206ENST00000614051 TSSK2Q96PF2 358 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 PRRG3Q9BZD7 231 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 Q9H521 79 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 DNAJC27Q9NZQ0 273 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 EMC3Q9P0I2 261 aa13.78□□□□□ -0.2
CCL3-206ENST00000614051 NOSIPQ9Y314 301 aaKnown RBP13.78□□□□□ -0.2
CCL3-206ENST00000614051 PRSS37A4D1T9 235 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 MBD3L4A6NDZ8 208 aaPredicted RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 MBD3L3A6NE82 208 aaPredicted RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 A6NIZ1 184 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 MBD3L5A6NJ08 208 aaPredicted RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 GPR171O14626 319 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 WBP4O75554 376 aaKnown RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 GYPBP06028 91 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 PGA4P0DJD7 388 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 PGA3P0DJD8 388 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 GLI4P10075 376 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 AGTR1P30556 359 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 FMO3P31513 532 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 PTGER4P35408 488 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 RAP1BP61224 184 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 SNRPGP62308 76 aaKnown RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 RAP1AP62834 184 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 SIRPAP78324 504 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 FMODQ06828 376 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 SMN1Q16637 294 aaKnown RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 PHYHD1Q5SRE7 291 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 LAIR2Q6ISS4 152 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 B3GNT6Q6ZMB0 384 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 CXXC5Q7LFL8 322 aaKnown RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 TMEM123Q8N131 208 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 MARVELD2Q8N4S9 558 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 MBD3L2Q8NHZ7 208 aaPredicted RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 ZNRF4Q8WWF5 429 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 SLC25A44Q96H78 314 aaPredicted RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 LRR1Q96L50 414 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 TM9SF2Q99805 663 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 TTYH2Q9BSA4 534 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 MRPL13Q9BYD1 178 aaKnown RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 SYT4Q9H2B2 425 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 C12orf49Q9H741 205 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 RPRD1BQ9NQG5 326 aaKnown RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 ASH1LQ9NR48 2969 aaKnown RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 OSGIN2Q9Y236 505 aa13.77□□□□□ -0.21
CCL3-206ENST00000614051 SETXQ7Z333 2677 aaKnown RBP13.77□□□□□ -0.21
CCL3-206ENST00000614051 TRGV8A0A0C4DH27 118 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 SLC22A23A1A5C7 686 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 PRR23D1E9PI22 279 aaPredicted RBP13.76□□□□□ -0.21
CCL3-206ENST00000614051 DCTN6O00399 190 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 SS18L1O75177 396 aaPredicted RBP13.76□□□□□ -0.21
CCL3-206ENST00000614051 ENTPD6O75354 484 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 PRR23D2P0DMB1 279 aaPredicted RBP13.76□□□□□ -0.21
CCL3-206ENST00000614051 CLRN1P58418 232 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 CDK5R2Q13319 367 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 MED21Q13503 144 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 GUSBP1Q15486 140 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 IGFBP7Q16270 282 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 TMEM201Q5SNT2 666 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 ADCK1Q86TW2 530 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 FAM26EQ8N5C1 309 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 NAXEQ8NCW5 288 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 NOXO1Q8NFA2 376 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 OR51L1Q8NGJ5 315 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 FBLIM1Q8WUP2 373 aa13.76□□□□□ -0.21
CCL3-206ENST00000614051 TRUB1Q8WWH5 349 aaKnown RBP13.76□□□□□ -0.21
CCL3-206ENST00000614051 ZNF566Q969W8 418 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms