RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
CSTF1-208ENST00000613138 ULBP2Q9BZM5 246 aa11.03□□□□□ -0.64
CSTF1-208ENST00000613138 POLR2J2Q9GZM3 115 aaKnown RBP11.03□□□□□ -0.64
CSTF1-208ENST00000613138 POLR2J3Q9H1A7 115 aaKnown RBP11.03□□□□□ -0.64
CSTF1-208ENST00000613138 GSX1Q9H4S2 264 aaPredicted RBP11.03□□□□□ -0.64
CSTF1-208ENST00000613138 NMNAT1Q9HAN9 279 aaPredicted RBP11.03□□□□□ -0.64
CSTF1-208ENST00000613138 GDF2Q9UK05 429 aaPredicted RBP11.03□□□□□ -0.64
CSTF1-208ENST00000613138 ATP23Q9Y6H3 246 aa11.03□□□□□ -0.64
CSTF1-208ENST00000613138 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.64
CSTF1-208ENST00000613138 TRIM64A6NGJ6 449 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 TRIM64BA6NI03 449 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 OR6C65A6NJZ3 312 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 ZNF99A8MXY4 864 aaPredicted RBP11.02□□□□□ -0.65
CSTF1-208ENST00000613138 ARHGEF9O43307 516 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 AKAP8O43823 692 aaKnown RBP11.02□□□□□ -0.65
CSTF1-208ENST00000613138 TRMUO75648 421 aaKnown RBP11.02□□□□□ -0.65
CSTF1-208ENST00000613138 SLC2A10O95528 541 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 TSPAN19P0C672 248 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 PGA4P0DJD7 388 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 PGA3P0DJD8 388 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 THRBP10828 461 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 PTAFRP25105 342 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 IDH3GP51553 393 aaPredicted RBP11.02□□□□□ -0.65
CSTF1-208ENST00000613138 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.65
CSTF1-208ENST00000613138 PRKCDQ05655 676 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 SAMD4BQ5PRF9 694 aaKnown RBP11.02□□□□□ -0.65
CSTF1-208ENST00000613138 KLHL17Q6TDP4 642 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 ZNF730Q6ZMV8 503 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 ZNF813Q6ZN06 617 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 LRRC75AQ8NAA5 344 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 OR6X1Q8NH79 312 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 SLC7A13Q8TCU3 470 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 TMEM171Q8WVE6 324 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 HDAC2Q92769 488 aaKnown RBP11.02□□□□□ -0.65
CSTF1-208ENST00000613138 FAM46AQ96IP4 442 aaKnown RBP11.02□□□□□ -0.65
CSTF1-208ENST00000613138 Q96MF0 132 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 HS6ST2Q96MM7 605 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 SLC38A2Q96QD8 506 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 GPA33Q99795 319 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 INIPQ9NRY2 104 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 GLTPQ9NZD2 209 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 RPS6KA6Q9UK32 745 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 POU2F3Q9UKI9 436 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.65
CSTF1-208ENST00000613138 ZFHX3Q15911 3703 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 ARPC4-TTLL3A0A0A6YYG9 625 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 H7C1C5 153 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 NDUFAB1O14561 156 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 IMPA2O14732 288 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 BCL10O95999 233 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 WNT11O96014 354 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 QDPRP09417 244 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 SAGP10523 405 aaPredicted RBP11.01□□□□□ -0.65
CSTF1-208ENST00000613138 CD79AP11912 226 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 CD99P14209 185 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 CDAP32320 146 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 LCN6P62502 163 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 MS4A2Q01362 244 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 FGD3Q5JSP0 725 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 ARMC4Q5T2S8 1044 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 OTPQ5XKR4 325 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 C16orf89Q6UX73 402 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 YTHDF3Q7Z739 585 aaKnown RBP11.01□□□□□ -0.65
CSTF1-208ENST00000613138 SKA3Q8IX90 412 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 LIPHQ8WWY8 451 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 ACOT11Q8WXI4 607 aaPredicted RBP11.01□□□□□ -0.65
CSTF1-208ENST00000613138 ZNF566Q969W8 418 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 PYURFQ96I23 114 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 BOD1Q96IK1 185 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 LRR1Q96L50 414 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 NSMCE2Q96MF7 247 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 ZNF75AQ96N20 296 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 TSPAN32Q96QS1 320 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 FOXB1Q99853 325 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 SH3GL3Q99963 347 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 TRAF4Q9BUZ4 470 aaPredicted RBP11.01□□□□□ -0.65
CSTF1-208ENST00000613138 GORASP2Q9H8Y8 452 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 DLL4Q9NR61 685 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 B3GNT2Q9NY97 397 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 IL20RAQ9UHF4 553 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 ZNF346Q9UL40 294 aaKnown RBP11.01□□□□□ -0.65
CSTF1-208ENST00000613138 POFUT2Q9Y2G5 429 aa11.01□□□□□ -0.65
CSTF1-208ENST00000613138 SETD2Q9BYW2 2564 aaPredicted RBP11□□□□□ -0.65
CSTF1-208ENST00000613138 A0A1W2PRG6 482 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 EFCAB9A8MZ26 197 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 MCIDASD6RGH6 385 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 OVOL3O00110 214 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 UBOX5O94941 541 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 IGLV1-44P01699 117 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 H1F0P07305 194 aaKnown RBP11□□□□□ -0.65
CSTF1-208ENST00000613138 FABP6P51161 128 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 SH3BGRP55822 239 aaPredicted RBP11□□□□□ -0.65
CSTF1-208ENST00000613138 ATP5J2P56134 94 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 CLRN1P58418 232 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 FXYD6P3P58550 94 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 CTXN1P60606 82 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 RPS4XP62701 263 aaKnown RBP11□□□□□ -0.65
CSTF1-208ENST00000613138 ERVK-25P63136 954 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 NAAAQ02083 359 aa11□□□□□ -0.65
CSTF1-208ENST00000613138 HGFACQ04756 655 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms