RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 MED6O75586 246 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 CHATP28329 748 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 RAD52P43351 418 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 MRPS21P82921 87 aaKnown RBP10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 HMGN3Q15651 99 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 USF2Q15853 346 aaPredicted RBP10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 GLYATL3Q5SZD4 288 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 TANGO2Q6ICL3 276 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 NLGN4YQ8NFZ3 816 aaPredicted RBP10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 DVL3Q92997 716 aaPredicted RBP10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 SEC22AQ96IW7 307 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 SLC19A3Q9BZV2 496 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 OR10A2Q9H208 303 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 SLC25A32Q9H2D1 315 aa10.03□□□□□ -0.8
CDC42EP3-206ENST00000611976 PRRT4C9JH25 899 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 GALR3O60755 368 aaPredicted RBP10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 SYNGR4O95473 234 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 LUMP51884 338 aaPredicted RBP10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 PCBP4P57723 403 aaKnown RBP10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 DBPQ10586 325 aaPredicted RBP10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 ZNF628Q5EBL2 1059 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 PAPD4Q6PIY7 484 aaKnown RBP10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 ANKRD33Q7Z3H0 272 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 OR4Q3Q8NH05 313 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 MARC2Q969Z3 335 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 RAB3CQ96E17 227 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 NELFAQ9H3P2 528 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 SLC23A2Q9UGH3 650 aa10.02□□□□□ -0.8
CDC42EP3-206ENST00000611976 M0QYG6 137 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 TNFRSF10CO14798 259 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 SSX5O60225 188 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 GMDSO60547 372 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR2F2O95006 317 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 LIMS3P0CW19 117 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 LIMS4P0CW20 117 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 RFX2P48378 723 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 RAG2P55895 527 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 FXYD4P59646 89 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR2F1Q13607 317 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 SLC9A3R2Q15599 337 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR13C5Q8NGS8 318 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR14K1Q8NGZ2 314 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 ST6GAL2Q96JF0 529 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 DCBLD2Q96PD2 775 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 ZNF649Q9BS31 505 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 TMEM59Q9BXS4 323 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 B3GALT1Q9Y5Z6 326 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 V9GYH0 126 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 TMED7-TICAM2A0A0A6YYA0 188 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 FAM230AA0A1W2PPH8 454 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 F5H5K5 113 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 BRINP1O60477 761 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 SDHAP31040 664 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 ZFP36L2P47974 494 aaKnown RBP10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 CAV2P51636 162 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 DOC2BQ14184 412 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 ZNF695Q8IW36 515 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 MIB2Q96AX9 1013 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 MARVELD1Q9BSK0 173 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 RBM24Q9BX46 236 aaKnown RBP10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 TSPAN10Q9H1Z9 355 aaPredicted RBP10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 FGF22Q9HCT0 170 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 C1orf123Q9NWV4 160 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 TMED7Q9Y3B3 224 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 EMC9Q9Y3B6 208 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 A0A0B4J2A0 478 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 HRO43593 1189 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 FGF17O60258 216 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 CSNK1A1P48729 337 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 HCCSP53701 268 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 PLA2G7Q13093 441 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 CLLU1Q5K131 121 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 ASTLQ6HA08 431 aaPredicted RBP10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 DUSP18Q8NEJ0 188 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR13C9Q8NGT0 318 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 FAM3CQ92520 227 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR5B12Q96R08 314 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 SEMA4CQ9C0C4 833 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 PLEKHB1Q9UF11 243 aaPredicted RBP10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 SHPKQ9UHJ6 478 aa10.02□□□□□ -0.81
CDC42EP3-206ENST00000611976 SULT2B1O00204 365 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 NUDT21O43809 227 aaKnown RBP10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 SSX4O60224 188 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 WDPCPO95876 746 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 MAOBP27338 520 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 ZNF169Q14929 603 aaPredicted RBP10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 PLPP7Q8NBV4 271 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 SPPL3Q8TCT6 385 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 TAS2R5Q9NYW4 299 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 COL4A5P29400 1685 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 TRIM64A6NGJ6 449 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 NUDT19A8MXV4 375 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 D6RAR5 112 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 K7EPK0 472 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 HOXB5P09067 269 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 ACHEP22303 614 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 TUBG1P23258 451 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 SFTPDP35247 375 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 HSD17B7P56937 341 aa10.01□□□□□ -0.81
CDC42EP3-206ENST00000611976 YBX1P67809 324 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms