RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 WDFY1Q8IWB7 410 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 TUSC5Q8IXB3 177 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 ZNF786Q8N393 782 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 FAM26EQ8N5C1 309 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 NPEPL1Q8NDH3 523 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 HDAC2Q92769 488 aaKnown RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 ZNF566Q969W8 418 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 Q96MT0 163 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 HCAR1Q9BXC0 346 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SYT4Q9H2B2 425 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 MED20Q9H944 212 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 RNF122Q9H9V4 155 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 BCO1Q9HAY6 547 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 RPRD1BQ9NQG5 326 aaKnown RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 CLN6Q9NWW5 311 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 CLEC4AQ9UMR7 237 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 CD8B2A6NJW9 211 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 ZNF724A8MTY0 619 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 ENTPD6O75354 484 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 TRMUO75648 421 aaKnown RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 PGA4P0DJD7 388 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 PGA3P0DJD8 388 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SELENOPP49908 381 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 TEKQ02763 1124 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 DBPQ10586 325 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 OCLNQ16625 522 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SMN1Q16637 294 aaKnown RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 TMEM201Q5SNT2 666 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SLC25A30Q5SVS4 291 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 MEDAGQ5VYS4 303 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 NXNL2Q5VZ03 156 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 NSUN5P2Q63ZY6 315 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 LAIR2Q6ISS4 152 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 NIPAL3Q6P499 406 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 UGT2A3Q6UWM9 527 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 ZIC4Q8N9L1 334 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SYT14Q8NB59 555 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 NOXO1Q8NFA2 376 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 BBS1Q8NFJ9 593 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 OR9Q1Q8NGQ5 310 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 WNT2BQ93097 391 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SLC25A44Q96H78 314 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 ZNF582Q96NG8 517 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 OR2M2Q96R28 347 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SNX18Q96RF0 628 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 DDOQ99489 341 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 CALHM2Q9HA72 323 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 VSX1Q9NZR4 365 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 RCE1Q9Y256 329 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SLC22A23A1A5C7 686 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 SNTNA6NMZ2 147 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 M0R3G1 203 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 SLC1A7O00341 560 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 PRODHO43272 600 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 ZNF432O94892 652 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 YES1P07947 543 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 CLUP10909 449 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 NUDT6P53370 316 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 CDH11P55287 796 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 CLRN1P58418 232 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 RPS7P62081 194 aaKnown RBP9.88□□□□□ -0.83
CTCFL-214ENST00000608108 KLHL12Q53G59 568 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 C6orf141Q5SZD1 244 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 C1orf185Q5T7R7 199 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 AADACL4Q5VUY2 407 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 RTL6Q6ICC9 239 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 OR2A2Q6IF42 318 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 AAED1Q7RTV5 226 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 GID4Q8IVV7 300 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 GCNT2Q8N0V5 402 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 TMEM123Q8N131 208 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 C9orf106Q8NAJ2 232 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 ST6GALNAC3Q8NDV1 305 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 BPIFB6Q8NFQ5 453 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 PTP4A1Q93096 173 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 TMEM45BQ96B21 275 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 GMPPAQ96IJ6 420 aaPredicted RBP9.88□□□□□ -0.83
CTCFL-214ENST00000608108 TSSK2Q96PF2 358 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 ALG12Q9BV10 488 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 MRPL13Q9BYD1 178 aaKnown RBP9.88□□□□□ -0.83
CTCFL-214ENST00000608108 NMNAT2Q9BZQ4 307 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 OR51V1Q9H2C8 321 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 TP63Q9H3D4 680 aaPredicted RBP9.88□□□□□ -0.83
CTCFL-214ENST00000608108 GP6Q9HCN6 339 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 GLRX2Q9NS18 164 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 H2AFY2Q9P0M6 372 aaPredicted RBP9.88□□□□□ -0.83
CTCFL-214ENST00000608108 TINAGQ9UJW2 476 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 ZNF835Q9Y2P0 537 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 NOSIPQ9Y314 301 aaKnown RBP9.88□□□□□ -0.83
CTCFL-214ENST00000608108 FAM215AQ9Y5M1 114 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 RELNP78509 3460 aa9.88□□□□□ -0.83
CTCFL-214ENST00000608108 FAM208BQ5VWN6 2430 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 CHD6Q8TD26 2715 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 SH3D21A4FU49 640 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 CENPBD1B2RD01 187 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 DCTN6O00399 190 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 XPNPEP2O43895 674 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 SLC43A1O75387 559 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 MRPL33O75394 65 aaKnown RBP9.87□□□□□ -0.83
CTCFL-214ENST00000608108 SMNDC1O75940 238 aaKnown RBP eCLIP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms