RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 IFI30P13284 250 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 MAKP20794 623 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 APOBEC3AP31941 199 aaPredicted RBP10.66□□□□□ -0.7
CTSA-210ENST00000606000 NUDT6P53370 316 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 ADIPOQQ15848 244 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 C1QTNF12Q5T7M4 302 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 LRFN4Q6PJG9 635 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 HIST3H2AQ7L7L0 130 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 TSEN54Q7Z6J9 526 aaKnown RBP10.66□□□□□ -0.7
CTSA-210ENST00000606000 CPLX4Q7Z7G2 160 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 IGFN1Q86VF2 1251 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 ZNF525Q8N782 197 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 FAM86B1Q8N7N1 296 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 ASB10Q8WXI3 467 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 HIST1H2ACQ93077 130 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 ZNF566Q969W8 418 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 FAM162AQ96A26 154 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 ADAD1Q96M93 576 aaKnown RBP10.66□□□□□ -0.7
CTSA-210ENST00000606000 ZNF75AQ96N20 296 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 ZNF347Q96SE7 839 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 KCTD14Q9BQ13 255 aaPredicted RBP10.66□□□□□ -0.7
CTSA-210ENST00000606000 KCNS3Q9BQ31 491 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 POLR2J2Q9GZM3 115 aaKnown RBP10.66□□□□□ -0.7
CTSA-210ENST00000606000 NSRP1Q9H0G5 558 aaKnown RBP10.66□□□□□ -0.7
CTSA-210ENST00000606000 POLR2J3Q9H1A7 115 aaKnown RBP10.66□□□□□ -0.7
CTSA-210ENST00000606000 GLTPQ9NZD2 209 aa10.66□□□□□ -0.7
CTSA-210ENST00000606000 IGKV1D-43A0A0B4J1Z2 117 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 H7C417 338 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 PRSS23O95084 383 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 BCL10O95999 233 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 IFNW1P05000 195 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 THRBP10828 461 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
CTSA-210ENST00000606000 THBS4P35443 961 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 ARR3P36575 388 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 PTDSS1P48651 473 aaKnown RBP10.65□□□□□ -0.7
CTSA-210ENST00000606000 ST3GAL3Q11203 375 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 TOP3AQ13472 1001 aaPredicted RBP10.65□□□□□ -0.7
CTSA-210ENST00000606000 LAPTM4AQ15012 233 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 MSMPQ1L6U9 139 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 SWI5Q1ZZU3 235 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 GSG1Q2KHT4 349 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 IFI44LQ53G44 452 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 KRT80Q6KB66 452 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 TBPL2Q6SJ96 375 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 FKBP9P1Q75LS8 142 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 ZNF627Q7L945 461 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 SKA3Q8IX90 412 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 NRMQ8IXM6 262 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 OFCC1Q8IZS5 231 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 CLDN22Q8N7P3 220 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 SYT14Q8NB59 555 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 NOXO1Q8NFA2 376 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 GEMIN6Q8WXD5 167 aaKnown RBP10.65□□□□□ -0.7
CTSA-210ENST00000606000 LZICQ8WZA0 190 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 CMTM5Q96DZ9 223 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 SLC25A44Q96H78 314 aaPredicted RBP10.65□□□□□ -0.7
CTSA-210ENST00000606000 SORCS2Q96PQ0 1159 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 SH3GL3Q99963 347 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 REG4Q9BYZ8 158 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 INIPQ9NRY2 104 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 ADA2Q9NZK5 511 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 AP3M1Q9Y2T2 418 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 V9GYQ6 96 aa10.65□□□□□ -0.7
CTSA-210ENST00000606000 HEATR1Q9H583 2144 aaKnown RBP10.64□□□□□ -0.71
CTSA-210ENST00000606000 ARID1AO14497 2285 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 ACANP16112 2415 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 TRAV27A0A087WT01 109 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 MCIDASD6RGH6 385 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 DHHO43323 396 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 TRMUO75648 421 aaKnown RBP10.64□□□□□ -0.71
CTSA-210ENST00000606000 SLC2A10O95528 541 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 QDPRP09417 244 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 OR4A8P0C604 315 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 TSPAN19P0C672 248 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 ZNF14P17017 642 aaPredicted RBP10.64□□□□□ -0.71
CTSA-210ENST00000606000 TCN1P20061 433 aaPredicted RBP10.64□□□□□ -0.71
CTSA-210ENST00000606000 PCSK6P29122 969 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 PRDX6P30041 224 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 GPR4P46093 362 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 GIPRP48546 466 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 CLRN1P58418 232 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 FMODQ06828 376 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 SNTB2Q13425 540 aaKnown RBP10.64□□□□□ -0.71
CTSA-210ENST00000606000 FHL1Q13642 323 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 ETFDHQ16134 617 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 FAM169BQ8N8A8 192 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 ANKS4BQ8N8V4 417 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 OR13C2Q8NGS9 318 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 LIPHQ8WWY8 451 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 HDAC2Q92769 488 aaKnown RBP10.64□□□□□ -0.71
CTSA-210ENST00000606000 MCHR2Q969V1 340 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 BPIFA2Q96DR5 249 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 FNDC11Q9BVV2 318 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 BARX1Q9HBU1 254 aaPredicted RBP10.64□□□□□ -0.71
CTSA-210ENST00000606000 SPAG4Q9NPE6 437 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 ARL8BQ9NVJ2 186 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 TMEM38BQ9NVV0 291 aa10.64□□□□□ -0.71
CTSA-210ENST00000606000 A0A087WUU8 490 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms