RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 SNAI1O95863 264 aaPredicted RBP3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 SERPINE2P07093 398 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 PSMB1P20618 241 aaKnown RBP3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 GATA2P23769 480 aaPredicted RBP3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 U2AF2P26368 475 aaKnown RBP eCLIP3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 ETV1P50549 477 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 ADARB1P78563 741 aaKnown RBP3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 RAD51Q06609 339 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 PDIA2Q13087 525 aaKnown RBP3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 CYTH1Q15438 398 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 LPAL2Q16609 132 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 TCTEX1D4Q5JR98 221 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 GPR157Q5UAW9 335 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 AADACL4Q5VUY2 407 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 ANKRD26P1Q6NSI1 321 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 GSG1LQ6UXU4 331 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 VTCN1Q7Z7D3 282 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 LINC00523Q86TU6 105 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 JAGN1Q8N5M9 183 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 OR52E5Q8NH55 327 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 OR9G1Q8NH87 305 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 MRAPQ8TCY5 172 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 CXorf40AQ8TE69 158 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 FAM222BQ8WU58 562 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 GIMAP1Q8WWP7 306 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 FRAT1Q92837 279 aaPredicted RBP3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 FAM122AQ96E09 287 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 FOXN4Q96NZ1 517 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 TSG101Q99816 390 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 NICN1Q9BSH3 213 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 NTN4Q9HB63 628 aa3.06□□□□□ -1.92
AC004542.1-201ENST00000602955 CCDC88BA6NC98 1476 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 COL5A2P05997 1499 aaPredicted RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 KIF27Q86VH2 1401 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 MROH7-TTC4A0A0A0MT08 1334 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 KIR2DL5BA0A0G2JN68 375 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 KIR2DL5BA0A0G2JPC4 375 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 EIF3GO75821 320 aaKnown RBP eCLIP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 CLIC3O95833 236 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 TIMP1P01033 207 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 HSPB1P04792 205 aaKnown RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 S100A9P06702 114 aaKnown RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 P0C879 139 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 AQP2P41181 271 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 VDAC2P45880 294 aaPredicted RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 SUB1P53999 127 aaKnown RBP eCLIP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 DIO3P55073 304 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 TAS2R19P59542 299 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 ZNF92Q03936 586 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 SF3A2Q15428 464 aaKnown RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 PGGHGQ32M88 737 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 CASC10Q5T4H9 136 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 TTC23LQ6PF05 361 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 ZNF620Q6ZNG0 422 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 HDDC2Q7Z4H3 204 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 FBXO16Q8IX29 292 aaPredicted RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 CMTM1Q8IZ96 169 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 KIR2DL5AQ8N109 375 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 SLC39A11Q8N1S5 342 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 PDCL2Q8N4E4 241 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 TTC29Q8NA56 475 aaPredicted RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 BBS1Q8NFJ9 593 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 KIR2DL5BQ8NHK3 375 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 SPATA3Q8NHX4 192 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 ZNF502Q8TBZ5 544 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 SLC7A13Q8TCU3 470 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 C7orf33Q8WU49 177 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 CAPSLQ8WWF8 208 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 DUS3LQ96G46 650 aaKnown RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 OPALINQ96PE5 141 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 UBXN6Q9BZV1 441 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 POLR2J2Q9GZM3 115 aaKnown RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 POLR2J3Q9H1A7 115 aaKnown RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 PLGRKTQ9HBL7 147 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 PXMP2Q9NR77 195 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 TMEM9Q9P0T7 183 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 XCL2Q9UBD3 114 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 ING4Q9UNL4 249 aa3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 ZNF256Q9Y2P7 627 aaPredicted RBP3.05□□□□□ -1.92
AC004542.1-201ENST00000602955 A0A0J9YYE9 177 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 GLYATL1P3A0A0U1RQE8 302 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 FAM231BA6NCW3 169 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 USP27XA6NNY8 438 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 M0R3G1 203 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 AIREO43918 545 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 CRLF1O75462 422 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 CCNB2O95067 398 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 TRBC1P01850 177 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 HLA-HP01893 362 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 SERPINA5P05154 406 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 UBCP0CG48 685 aaKnown RBP3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 COX7A1P24310 79 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 CASQ1P31415 396 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 FMO3P31513 532 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 CRISP1P54107 249 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 GPNMBQ14956 572 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 CNIH2Q6PI25 160 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 PEX26Q7Z412 305 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 APRG1Q8IVJ8 170 aa3.04□□□□□ -1.92
AC004542.1-201ENST00000602955 ZNF100Q8IYN0 542 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms