RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 INTS12Q96CB8 462 aaKnown RBP16.53■□□□□ 0.24
SSBP4-212ENST00000601919 RBP7Q96R05 134 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 DDOQ99489 341 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 BCO1Q9HAY6 547 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 WARS2Q9UGM6 360 aaKnown RBP16.53■□□□□ 0.24
SSBP4-212ENST00000601919 LAMA5O15230 3695 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 PKD1L2Q7Z442 2459 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 CD8B2A6NJW9 211 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 YES1P07947 543 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 HTR1FP30939 366 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 CENPAP49450 140 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 BLVRAP53004 296 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 RPS7P62081 194 aaKnown RBP16.52■□□□□ 0.24
SSBP4-212ENST00000601919 SMN1Q16637 294 aaKnown RBP16.52■□□□□ 0.24
SSBP4-212ENST00000601919 KCTD21Q4G0X4 260 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 ACSF3Q4G176 576 aaPredicted RBP16.52■□□□□ 0.24
SSBP4-212ENST00000601919 KLHL12Q53G59 568 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 THEM4Q5T1C6 240 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 NSUN5P2Q63ZY6 315 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 OR2A2Q6IF42 318 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 LAIR2Q6ISS4 152 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 MEPCEQ7L2J0 689 aaKnown RBP16.52■□□□□ 0.24
SSBP4-212ENST00000601919 AAED1Q7RTV5 226 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 FGD2Q7Z6J4 655 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 ZIC4Q8N9L1 334 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF385AQ96PM9 386 aaKnown RBP16.52■□□□□ 0.24
SSBP4-212ENST00000601919 KCNK17Q96T54 332 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 TM9SF2Q99805 663 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 EMC6Q9BV81 110 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 NMNAT2Q9BZQ4 307 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 SYT4Q9H2B2 425 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 OR51V1Q9H2C8 321 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 CCNB1IP1Q9NPC3 277 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 RPRD1BQ9NQG5 326 aaKnown RBP16.52■□□□□ 0.24
SSBP4-212ENST00000601919 MOKQ9UQ07 419 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 NOSIPQ9Y314 301 aaKnown RBP16.52■□□□□ 0.24
SSBP4-212ENST00000601919 FKBP7Q9Y680 259 aa16.52■□□□□ 0.24
SSBP4-212ENST00000601919 SLC22A23A1A5C7 686 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 MAGEA13PA6NCF6 341 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 EFCAB10A6NFE3 127 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 OR6C65A6NJZ3 312 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 H7C1C5 153 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 SLC43A1O75387 559 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 SMNDC1O75940 238 aaKnown RBP eCLIP16.51■□□□□ 0.23
SSBP4-212ENST00000601919 PGA4P0DJD7 388 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 PGA3P0DJD8 388 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 SPI1P17947 270 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 CRHBPP24387 322 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 EEF1B2P24534 225 aaKnown RBP16.51■□□□□ 0.23
SSBP4-212ENST00000601919 GABARAPL2P60520 117 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 LCN6P62502 163 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 CAMK2DQ13557 499 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 APOFQ13790 326 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 CD163Q86VB7 1156 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 ZNF540Q8NDQ6 660 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 NOXO1Q8NFA2 376 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 OR6N1Q8NGY5 312 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 MYDGFQ969H8 173 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 GMPPAQ96IJ6 420 aaPredicted RBP16.51■□□□□ 0.23
SSBP4-212ENST00000601919 OR2M2Q96R28 347 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 MRPL13Q9BYD1 178 aaKnown RBP16.51■□□□□ 0.23
SSBP4-212ENST00000601919 MED20Q9H944 212 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 ASB6Q9NWX5 421 aa16.51■□□□□ 0.23
SSBP4-212ENST00000601919 CNOT2Q9NZN8 540 aaKnown RBP16.51■□□□□ 0.23
SSBP4-212ENST00000601919 TLN1Q9Y490 2541 aaKnown RBP16.51■□□□□ 0.23
SSBP4-212ENST00000601919 XPNPEP2O43895 674 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 MRPL33O75394 65 aaKnown RBP16.5■□□□□ 0.23
SSBP4-212ENST00000601919 ZNF432O94892 652 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 TGM6O95932 706 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 RPSAP08865 295 aaKnown RBP16.5■□□□□ 0.23
SSBP4-212ENST00000601919 MTNR1AP48039 350 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 CSNK1A1P48729 337 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 NUDT6P53370 316 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 ZNF91Q05481 1191 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 RUNX1T1Q06455 604 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 POU4F2Q12837 409 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 KLHL22Q53GT1 634 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 PRR30Q53SZ7 412 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-212ENST00000601919 C1orf185Q5T7R7 199 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 CARD17Q5XLA6 110 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 PCSK4Q6UW60 755 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 BCDIN3DQ7Z5W3 292 aaKnown RBP16.5■□□□□ 0.23
SSBP4-212ENST00000601919 SYT14Q8NB59 555 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 PROKR2Q8NFJ6 384 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 BBS1Q8NFJ9 593 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 OR9Q1Q8NGQ5 310 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 CPT1CQ8TCG5 803 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 TEAD3Q99594 435 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 TP63Q9H3D4 680 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-212ENST00000601919 ZNF696Q9H7X3 374 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 SRA1Q9HD15 236 aaKnown RBP16.5■□□□□ 0.23
SSBP4-212ENST00000601919 B3GAT2Q9NPZ5 323 aa16.5■□□□□ 0.23
SSBP4-212ENST00000601919 DSPP15924 2871 aaKnown RBP16.5■□□□□ 0.23
SSBP4-212ENST00000601919 PTGES3LE9PB15 166 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 SLC16A7O60669 478 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 KHDRBS3O75525 346 aaKnown RBP16.49■□□□□ 0.23
SSBP4-212ENST00000601919 GLCEO94923 617 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 LYNP07948 512 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 DBTP11182 482 aaKnown RBP16.49■□□□□ 0.23
SSBP4-212ENST00000601919 PIPP12273 146 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms