RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 FUZQ9BT04 418 aa12.07□□□□□ -0.48
IRF3-225ENST00000600022 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
IRF3-225ENST00000600022 TEX12Q9BXU0 123 aa12.07□□□□□ -0.48
IRF3-225ENST00000600022 DGCR6LQ9BY27 220 aa12.07□□□□□ -0.48
IRF3-225ENST00000600022 GABARAPL3Q9BY60 117 aa12.07□□□□□ -0.48
IRF3-225ENST00000600022 YTHDF1Q9BYJ9 559 aaKnown RBP12.07□□□□□ -0.48
IRF3-225ENST00000600022 LAT2Q9GZY6 243 aa12.07□□□□□ -0.48
IRF3-225ENST00000600022 ESRP2Q9H6T0 727 aaKnown RBP12.07□□□□□ -0.48
IRF3-225ENST00000600022 BATF3Q9NR55 127 aa12.07□□□□□ -0.48
IRF3-225ENST00000600022 CISD1Q9NZ45 108 aaKnown RBP12.07□□□□□ -0.48
IRF3-225ENST00000600022 BLOC1S6Q9UL45 172 aa12.07□□□□□ -0.48
IRF3-225ENST00000600022 B3GALT5Q9Y2C3 310 aa12.07□□□□□ -0.48
IRF3-225ENST00000600022 A0A096LNT2 108 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 SSX4O60224 188 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 EIF4E2O60573 245 aaKnown RBP12.06□□□□□ -0.48
IRF3-225ENST00000600022 MITFO75030 526 aaPredicted RBP12.06□□□□□ -0.48
IRF3-225ENST00000600022 TMCC2O75069 709 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 NUDT14O95848 222 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 PRKCAP17252 672 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 NTF4P34130 210 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 CCR4P51679 360 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 SUMO3P55854 103 aaPredicted RBP12.06□□□□□ -0.48
IRF3-225ENST00000600022 HOXC5Q00444 222 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 IL5RAQ01344 420 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 ITGADQ13349 1161 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 TOP3AQ13472 1001 aaPredicted RBP12.06□□□□□ -0.48
IRF3-225ENST00000600022 STK11Q15831 433 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 PDSS1Q5T2R2 415 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 GTF2IRD2BQ6EKJ0 949 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 BHLHA15Q7RTS1 189 aaPredicted RBP12.06□□□□□ -0.48
IRF3-225ENST00000600022 GTF2IRD2Q86UP8 949 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 RNF113BQ8IZP6 322 aaKnown RBP12.06□□□□□ -0.48
IRF3-225ENST00000600022 ZNF786Q8N393 782 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 LSMEM1Q8N8F7 131 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 DNAJA4Q8WW22 397 aaPredicted RBP12.06□□□□□ -0.48
IRF3-225ENST00000600022 MPP4Q96JB8 637 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 MUS81Q96NY9 551 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 SLC7A7Q9UM01 511 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 TMEM5Q9Y2B1 443 aa12.06□□□□□ -0.48
IRF3-225ENST00000600022 A0A0B4J2E0 115 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 A0A1B0GX12 115 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 H3BN98 237 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 SMAD9O15198 467 aaKnown RBP12.05□□□□□ -0.48
IRF3-225ENST00000600022 CHP2O43745 196 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 GASTP01350 101 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 IGHV3-9P01782 118 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 TP53P04637 393 aaPredicted RBP12.05□□□□□ -0.48
IRF3-225ENST00000600022 GNAO1P09471 354 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 OSMP13725 252 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 FUT4P22083 530 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 IGHV1-2P23083 117 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 RBM34P42696 430 aaKnown RBP12.05□□□□□ -0.48
IRF3-225ENST00000600022 FOXG1P55316 489 aaPredicted RBP12.05□□□□□ -0.48
IRF3-225ENST00000600022 CDC42P60953 191 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 SRSF2Q01130 221 aaKnown RBP12.05□□□□□ -0.48
IRF3-225ENST00000600022 SPOCK1Q08629 439 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 RNPS1Q15287 305 aaKnown RBP12.05□□□□□ -0.48
IRF3-225ENST00000600022 ZNF691Q5VV52 312 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 PGBD2Q6P3X8 592 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 TMEM154Q6P9G4 183 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 ULK3Q6PHR2 472 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 MBOAT2Q6ZWT7 520 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 USP51Q70EK9 711 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 CADM2Q8N3J6 435 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 CPNE4Q96A23 557 aaPredicted RBP12.05□□□□□ -0.48
IRF3-225ENST00000600022 DNAJA3Q96EY1 480 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 PRRG3Q9BZD7 231 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 GRIP2Q9C0E4 1043 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 FANCFQ9NPI8 374 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 IMPAD1Q9NX62 359 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 UBAP1Q9NZ09 502 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 MED31Q9Y3C7 131 aa12.05□□□□□ -0.48
IRF3-225ENST00000600022 A0A1B0GWA3 101 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 A0A1W2PR80 420 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 E7EQL1 145 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 MPZL2O60487 215 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 LYPD3O95274 346 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 THY1P04216 161 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 PNMTP11086 282 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 POU1F1P28069 291 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 RYKP34925 604 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 EIF1P41567 113 aaKnown RBP12.04□□□□□ -0.48
IRF3-225ENST00000600022 OR3A2P47893 321 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 P2RX1P51575 399 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 P2RY6Q15077 328 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 SEC23BQ15437 767 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 ALG10BQ5I7T1 473 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 RBM48Q5RL73 367 aaKnown RBP12.04□□□□□ -0.48
IRF3-225ENST00000600022 WBP2NLQ6ICG8 309 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 ZNF770Q6IQ21 691 aaPredicted RBP12.04□□□□□ -0.48
IRF3-225ENST00000600022 C1orf94Q6P1W5 598 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 CD300LDQ6UXZ3 194 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 Q6ZT83 130 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 ZNF563Q8TA94 476 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 TMEM239Q8WW34 195 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 PRR14Q9BWN1 585 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 ZNF696Q9H7X3 374 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 BCO1Q9HAY6 547 aa12.04□□□□□ -0.48
IRF3-225ENST00000600022 TIGARQ9NQ88 270 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms