RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FAM122BQ7Z309 247 aa15□□□□□ -0.01
LIG1-206ENST00000594067 HAVCR1Q96D42 359 aa15□□□□□ -0.01
LIG1-206ENST00000594067 DNAJA3Q96EY1 480 aa15□□□□□ -0.01
LIG1-206ENST00000594067 SLITRK2Q9H156 845 aa15□□□□□ -0.01
LIG1-206ENST00000594067 TCRBV21S2A2A0A5A6 115 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 LGALS8O00214 317 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 TOR1AO14656 332 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 NDUFB6O95139 128 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 TACSTD2P09758 323 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 S100A11P31949 105 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 TAS2R20P59543 309 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 TFAP2EQ6VUC0 442 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 TMPRSS12Q86WS5 348 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 DND1Q8IYX4 353 aaKnown RBP14.99□□□□□ -0.01
LIG1-206ENST00000594067 EXD3Q8N9H8 876 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 OR52B4Q8NGK2 314 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 OR8K3Q8NH51 312 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 PHOSPHO1Q8TCT1 267 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 ZNF524Q96C55 264 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 OR1F2PQ96R84 312 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 GPN1Q9HCN4 374 aaPredicted RBP14.99□□□□□ -0.01
LIG1-206ENST00000594067 SESN1Q9Y6P5 492 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 KRBOX1C9JBD0 128 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 GMFGO60234 142 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 SNAPC5O75971 98 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 HIST1H2ABP04908 130 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 RAB40ALP0C0E4 278 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 CALCBP10092 127 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 CALCRP30988 508 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 SEC61A1P61619 476 aaKnown RBP14.99□□□□□ -0.01
LIG1-206ENST00000594067 LTBQ06643 244 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 EIF2B5Q13144 721 aaKnown RBP14.99□□□□□ -0.01
LIG1-206ENST00000594067 ZNF273Q14593 569 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 PRTGQ2VWP7 1150 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 KLHL26Q53HC5 615 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 HIST3H2AQ7L7L0 130 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 ATG4DQ86TL0 474 aaPredicted RBP14.99□□□□□ -0.01
LIG1-206ENST00000594067 STPG2Q8N412 459 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 LRRC75AQ8NAA5 344 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 OR10AC1Q8NH08 325 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 SCARB1Q8WTV0 552 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 RAB40AQ8WXH6 277 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 HIST1H2ACQ93077 130 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 DMRTA2Q96SC8 542 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 KLHDC3Q9BQ90 382 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 SLC19A3Q9BZV2 496 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 SEMA4CQ9C0C4 833 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 HIF3AQ9Y2N7 669 aa14.99□□□□□ -0.01
LIG1-206ENST00000594067 MYO9BQ13459 2157 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 B4DGG1 531 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 CLDN4O14493 209 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 GPANK1O95872 356 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 ICAM2P13598 275 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 OTPQ5XKR4 325 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 B3GNTL1Q67FW5 361 aaPredicted RBP14.98□□□□□ -0.01
LIG1-206ENST00000594067 WBP2NLQ6ICG8 309 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 MED25Q71SY5 747 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 ZNF595Q8IYB9 648 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 PMEPA1Q969W9 287 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 MIB2Q96AX9 1013 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 TRAV8-7A0A075B6U6 113 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 H0YC42 278 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 ARPC5O15511 151 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 SEMA4FO95754 770 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 CTSEP14091 401 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 GABRA1P14867 456 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 HPGDP15428 266 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 EN2P19622 333 aaPredicted RBP14.98□□□□□ -0.01
LIG1-206ENST00000594067 ITPKBP27987 946 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 SDHAP31040 664 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 SLC25A1P53007 311 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 IGLV3-21P80748 117 aaPredicted RBP14.98□□□□□ -0.01
LIG1-206ENST00000594067 FUT7Q11130 342 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 CBFBQ13951 182 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 GRM7Q14831 915 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 TMUB2Q71RG4 321 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 LRRTM1Q86UE6 522 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 ZNF615Q8N8J6 731 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 OR52H1Q8NGJ2 320 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 OR6N2Q8NGY6 317 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 MMABQ96EY8 250 aaPredicted RBP14.98□□□□□ -0.01
LIG1-206ENST00000594067 ELF4Q99607 663 aaPredicted RBP14.98□□□□□ -0.01
LIG1-206ENST00000594067 DPYSL5Q9BPU6 564 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 ULBP3Q9BZM4 244 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 MMP25Q9NPA2 562 aa14.98□□□□□ -0.01
LIG1-206ENST00000594067 EML5Q05BV3 1969 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 OR5K4A6NMS3 321 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 ANXA2P2A6NMY6 339 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 HMSDA8MTL9 139 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 PYCARD-AS1I3L0S3 204 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 ACOT7O00154 380 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 ABHD16AO95870 558 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 FGF2P09038 288 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 VSIG10L2P0DP72 767 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 RABIFP47224 123 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 MRPS10P82664 201 aaKnown RBP14.97□□□□□ -0.01
LIG1-206ENST00000594067 EGR4Q05215 589 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 HYAL1Q12794 435 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 C2orf68Q2NKX9 166 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 CDC20BQ86Y33 519 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms