RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 MAD2L1BPQ15013 274 aaPredicted RBP19.46■□□□□ 0.71
SSBP4-203ENST00000593641 FXNQ16595 210 aa19.46■□□□□ 0.71
SSBP4-203ENST00000593641 NHLRC1Q6VVB1 395 aa19.46■□□□□ 0.71
SSBP4-203ENST00000593641 PIWIL3Q7Z3Z3 882 aaKnown RBP19.46■□□□□ 0.71
SSBP4-203ENST00000593641 CLDND2Q8NHS1 167 aa19.46■□□□□ 0.71
SSBP4-203ENST00000593641 TLCD1Q96CP7 247 aa19.46■□□□□ 0.71
SSBP4-203ENST00000593641 MCHR1Q99705 422 aa19.46■□□□□ 0.71
SSBP4-203ENST00000593641 IKZF5Q9H5V7 419 aa19.46■□□□□ 0.71
SSBP4-203ENST00000593641 ZNF346Q9UL40 294 aaKnown RBP19.46■□□□□ 0.71
SSBP4-203ENST00000593641 TPST2O60704 377 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 TFP02787 698 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 GPX2P18283 190 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 SEC24CP53992 1094 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 SCGB2A2Q13296 93 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 ZNF613Q6PF04 617 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 LRP11Q86VZ4 500 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 MEX3DQ86XN8 651 aaKnown RBP19.45■□□□□ 0.7
SSBP4-203ENST00000593641 WDFY1Q8IWB7 410 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 SMYD1Q8NB12 490 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 WFDC6Q9BQY6 131 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 METTL17Q9H7H0 456 aaPredicted RBP19.45■□□□□ 0.7
SSBP4-203ENST00000593641 TMBIM4Q9HC24 238 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 GLTPQ9NZD2 209 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 MYEF2Q9P2K5 600 aaKnown RBP19.45■□□□□ 0.7
SSBP4-203ENST00000593641 GRIP1Q9Y3R0 1128 aa19.45■□□□□ 0.7
SSBP4-203ENST00000593641 TRBV5-3A0A0A0MS03 114 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 M0R3H8 397 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 CHP2O43745 196 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 FMO6PO60774 539 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 MFN2O95140 757 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 SERPINA5P05154 406 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 MSMBP08118 114 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 COL8A2P25067 703 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 IDH3AP50213 366 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 TMEM33P57088 247 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 SELENOVP59797 346 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 RGS7BPQ6MZT1 257 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-203ENST00000593641 SHQ1Q6PI26 577 aaKnown RBP19.44■□□□□ 0.7
SSBP4-203ENST00000593641 SLC35D2Q76EJ3 337 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 OR6X1Q8NH79 312 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 ZNF566Q969W8 418 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 TMEM186Q96B77 213 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 EBF4Q9BQW3 602 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 CCDC28BQ9BUN5 200 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 ZNF385DQ9H6B1 395 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 LPAR2Q9HBW0 351 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 ZNF275Q9NSD4 429 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-203ENST00000593641 HIF1ANQ9NWT6 349 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 GPR160Q9UJ42 338 aa19.44■□□□□ 0.7
SSBP4-203ENST00000593641 PPIHO43447 177 aaKnown RBP19.43■□□□□ 0.7
SSBP4-203ENST00000593641 FARS2O95363 451 aaKnown RBP19.43■□□□□ 0.7
SSBP4-203ENST00000593641 PATE4P0C8F1 98 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 OR8G3PP0DMU2 310 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 NAT2P11245 290 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 MRPS11P82912 194 aaKnown RBP19.43■□□□□ 0.7
SSBP4-203ENST00000593641 NKPD1Q17RQ9 610 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 AGKQ53H12 422 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 C12orf54Q6X4T0 127 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 CARM1Q86X55 608 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 SKA3Q8IX90 412 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 SLC22A24Q8N4F4 322 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 C11orf65Q8NCR3 313 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 LRRC8CQ8TDW0 803 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 TMEM54Q969K7 222 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 CPPED1Q9BRF8 314 aaPredicted RBP19.43■□□□□ 0.7
SSBP4-203ENST00000593641 ZNF416Q9BWM5 594 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 SLC52A3Q9NQ40 469 aa19.43■□□□□ 0.7
SSBP4-203ENST00000593641 DYSFO75923 2080 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 A0A0A6YYJ9 748 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 SLC22A23A1A5C7 686 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 FAM157AC9JC47 383 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 RNF13O43567 381 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 CYP51A1Q16850 503 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 TTC33Q6PID6 262 aaPredicted RBP19.42■□□□□ 0.7
SSBP4-203ENST00000593641 DEF8Q6ZN54 512 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 ZNF584Q8IVC4 421 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.42■□□□□ 0.7
SSBP4-203ENST00000593641 SLC30A7Q8NEW0 376 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 OR51F2Q8NH61 342 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 ARHGDIGQ99819 225 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 NANSQ9NR45 359 aa19.42■□□□□ 0.7
SSBP4-203ENST00000593641 CPSF4LA6NMK7 179 aaKnown RBP19.41■□□□□ 0.7
SSBP4-203ENST00000593641 NCR1O76036 304 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 CH25HO95992 272 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 VIMP08670 466 aaKnown RBP19.41■□□□□ 0.7
SSBP4-203ENST00000593641 GAAP10253 952 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 ZNF74Q16587 644 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 ALKBH6Q3KRA9 238 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 ENTPD8Q5MY95 495 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 TMEM53Q6P2H8 277 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 LINC00114Q6XXX2 140 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 WDR88Q6ZMY6 472 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 SNX33Q8WV41 574 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 YIPF5Q969M3 257 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 SLC25A44Q96H78 314 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-203ENST00000593641 LRRC37BQ96QE4 947 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 RACGAP1Q9H0H5 632 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 C1orf198Q9H425 327 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 RNF121Q9H920 327 aa19.41■□□□□ 0.7
SSBP4-203ENST00000593641 CDH20Q9HBT6 801 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms