RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 SSU72Q9NP77 194 aaKnown RBP13.57□□□□□ -0.24
DDX39A-216ENST00000591275 CACNG2Q9Y698 323 aa13.57□□□□□ -0.24
DDX39A-216ENST00000591275 A0A0G2JPF8 293 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 A0A1B0GWA3 101 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 HNRNPCL2B2RXH8 293 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 HNRNPCL3B7ZW38 293 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 J3QLI3 93 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 HNRNPCL1O60812 293 aaKnown RBP13.56□□□□□ -0.24
DDX39A-216ENST00000591275 SERPINI2O75830 405 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 UBL3O95164 117 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 IGHV2-5P01817 119 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 HNRNPCL4P0DMR1 293 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 CCL2P13500 99 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 HTR2AP28223 471 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 RAD52P43351 418 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 SLC1A6P48664 564 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 ERVS71-1P61550 626 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 LRRC74AQ0VAA2 488 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 OGFOD2Q6N063 350 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 TREML4Q6UXN2 200 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 NET1Q7Z628 596 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-216ENST00000591275 SKA3Q8IX90 412 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 PAQR4Q8N4S7 273 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-216ENST00000591275 SNX33Q8WV41 574 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 GTF3AQ92664 365 aaKnown RBP13.56□□□□□ -0.24
DDX39A-216ENST00000591275 ZBTB18Q99592 522 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 MEAF6Q9HAF1 191 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 TPT1P8Q9HAU6 139 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 PNPOQ9NVS9 261 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 KLHL14Q9P2G3 628 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 OPN4Q9UHM6 478 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-216ENST00000591275 IFT52Q9Y366 437 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 WIPI2Q9Y4P8 454 aa13.56□□□□□ -0.24
DDX39A-216ENST00000591275 A0A087WUJ7 227 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 IGHV1-69-2A0A0G2JMI3 117 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 ZNF726A6NNF4 738 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 TPD52L2O43399 206 aaKnown RBP13.55□□□□□ -0.24
DDX39A-216ENST00000591275 ANP32DO95626 131 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 SERPINA5P05154 406 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 NUDT7P0C024 238 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 FPR2P25090 351 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 CRYBB2P43320 205 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 KLF3P57682 345 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-216ENST00000591275 SELENOVP59797 346 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 MIDNQ504T8 468 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 C5orf46Q6UWT4 87 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 USP51Q70EK9 711 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 SNX32Q86XE0 403 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 SIGLECL1Q8N7X8 197 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 ICA1LQ8NDH6 482 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 ADPRHL1Q8NDY3 354 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 SYNPRQ8TBG9 265 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 MAL2Q969L2 176 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 VPS33AQ96AX1 596 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 DENND2DQ9H6A0 471 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-216ENST00000591275 GPR160Q9UJ42 338 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 GPR45Q9Y5Y3 372 aa13.55□□□□□ -0.24
DDX39A-216ENST00000591275 TMEM247A6NEH6 219 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 CLDN25C9JDP6 229 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 SDHDO14521 159 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 FSHBP01225 129 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 LCKP06239 509 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 CSNK1A1P48729 337 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 LCN2P80188 198 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 GLO1Q04760 184 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 RBBP4Q09028 425 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 PMS2P3Q13401 168 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 TSTQ16762 297 aaKnown RBP13.54□□□□□ -0.24
DDX39A-216ENST00000591275 PCGF3Q3KNV8 242 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 ALG10BQ5I7T1 473 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 NHLRC1Q6VVB1 395 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 RBMS3Q6XE24 437 aaKnown RBP13.54□□□□□ -0.24
DDX39A-216ENST00000591275 COMTD1Q86VU5 262 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 SLC30A7Q8NEW0 376 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 DVL3Q92997 716 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-216ENST00000591275 SLC41A3Q96GZ6 507 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 MOGAT1Q96PD6 335 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 ASPNQ9BXN1 380 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 RSPO3Q9BXY4 272 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-216ENST00000591275 C12orf10Q9HB07 376 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 NTN4Q9HB63 628 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 DECR2Q9NUI1 292 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 FBXL3Q9UKT7 428 aa13.54□□□□□ -0.24
DDX39A-216ENST00000591275 IGLV3-9A0A075B6K5 115 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 LRRN3E7EW58 273 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 BGLAPP02818 100 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 ZNF250P15622 560 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 BGNP21810 368 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 AHCYP23526 432 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 GNGT1P63211 74 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 TEKQ02763 1124 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 PUDPQ08623 228 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 C10orf53Q8N6V4 93 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 LSMEM1Q8N8F7 131 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 DNAJA4Q8WW22 397 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-216ENST00000591275 SH3GL3Q99963 347 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 GAL3ST1Q99999 423 aa13.53□□□□□ -0.24
DDX39A-216ENST00000591275 WDR55Q9H6Y2 383 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms