RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ZNF627Q7L945 461 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 WDFY1Q8IWB7 410 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 CCDC36Q8IYA8 594 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 OR13C2Q8NGS9 318 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 OR51A7Q8NH64 312 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 MOSPD2Q8NHP6 518 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 ASB10Q8WXI3 467 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 BCL2L2Q92843 193 aaPredicted RBP10.42□□□□□ -0.74
LIG3-213ENST00000590630 TMEM54Q969K7 222 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 ZNF837Q96EG3 531 aaPredicted RBP10.42□□□□□ -0.74
LIG3-213ENST00000590630 FAM46AQ96IP4 442 aaKnown RBP10.42□□□□□ -0.74
LIG3-213ENST00000590630 RADILQ96JH8 1075 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 NDEL1Q9GZM8 345 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 TXNIPQ9H3M7 391 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 LIME1Q9H400 295 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 GLTPQ9NZD2 209 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 ITPR3Q14573 2671 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 ARID1AO14497 2285 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 TRAV27A0A087WT01 109 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 A0A1W2PR80 420 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 DPRXA6NFQ7 191 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 IGHMP01871 453 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 NR2C1P13056 603 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 DNASE1P24855 282 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 RRM2P31350 389 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 IFNGR2P38484 337 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 OMPP47874 163 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 LIMS1P48059 325 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 ZNF83P51522 516 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 CLRN1P58418 232 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 CHRNB3Q05901 458 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 FHL1Q13642 323 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 KEAP1Q14145 624 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 HIST3H3Q16695 136 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 ZBED5Q49AG3 693 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 ARMC4Q5T2S8 1044 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 FAM205BPQ63HN1 556 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 ADAM5Q6NVV9 412 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 C20orf204Q6ZNR8 217 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 MEX3DQ86XN8 651 aaKnown RBP10.41□□□□□ -0.74
LIG3-213ENST00000590630 NOXO1Q8NFA2 376 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 ALPK1Q96QP1 1244 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 MRPL13Q9BYD1 178 aaKnown RBP10.41□□□□□ -0.74
LIG3-213ENST00000590630 NELFAQ9H3P2 528 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 UBTD1Q9HAC8 227 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 TMCC3Q9ULS5 477 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 MGAT4BQ9UQ53 548 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 AURKCQ9UQB9 309 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 POFUT2Q9Y2G5 429 aa10.41□□□□□ -0.74
LIG3-213ENST00000590630 A0A096LPE4 126 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 A0A1W2PPZ6 126 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 AQP12BA6NM10 295 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 M0R1B8 84 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 ABCD4O14678 606 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 HS3ST1O14792 307 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 ENTPD5O75356 428 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 ATE1O95260 518 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 RAP2AP10114 183 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 ACADSP16219 412 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 CD40P25942 277 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 HMGA2P52926 109 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 CTXN1P60606 82 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 RPL27P61353 136 aaKnown RBP10.4□□□□□ -0.74
LIG3-213ENST00000590630 RUNX1T1Q06455 604 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 FLOT2Q14254 428 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 C3orf36Q3SXR2 165 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 AQP12AQ8IXF9 295 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 LINC00471Q8N535 108 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 FAM169BQ8N8A8 192 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 LRRC75AQ8NAA5 344 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 FNDC8Q8TC99 324 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 MBD6Q96DN6 1003 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 TNFRSF13CQ96RJ3 184 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 FOXB1Q99853 325 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 CCM2LQ9NUG4 571 aaPredicted RBP10.4□□□□□ -0.74
LIG3-213ENST00000590630 SIGLEC7Q9Y286 467 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 PLEKHA6Q9Y2H5 1048 aa10.4□□□□□ -0.74
LIG3-213ENST00000590630 DHRS12A0PJE2 317 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 A6NIZ1 184 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 GSC2O15499 205 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 DHHO43323 396 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 OR10H3O60404 316 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 TRMUO75648 421 aaKnown RBP10.39□□□□□ -0.75
LIG3-213ENST00000590630 NDUFB2O95178 105 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 PLAUP00749 431 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 CD14P08571 375 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 QDPRP09417 244 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 B4GALT1P15291 398 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 FPR3P25089 353 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 RPL4P36578 427 aaKnown RBP10.39□□□□□ -0.75
LIG3-213ENST00000590630 ZNF133P52736 654 aaPredicted RBP10.39□□□□□ -0.75
LIG3-213ENST00000590630 IST1P53990 364 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 RAP1BP61224 184 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 RAP1AP62834 184 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 TOP3AQ13472 1001 aaPredicted RBP10.39□□□□□ -0.75
LIG3-213ENST00000590630 NRN1LQ496H8 165 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 ZNF672Q499Z4 452 aaPredicted RBP10.39□□□□□ -0.75
LIG3-213ENST00000590630 LRFN4Q6PJG9 635 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 ZNF813Q6ZN06 617 aa10.39□□□□□ -0.75
LIG3-213ENST00000590630 ZER1Q7Z7L7 766 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms