RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 A0A1W2PP55 124 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 SCAF4O95104 1147 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 ATP1B3P54709 279 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 PRDX1Q06830 199 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 FAM74A1Q5RGS3 127 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 TEX19Q8NA77 164 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 DUSP18Q8NEJ0 188 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 PDCD1LG2Q9BQ51 273 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 DEFB126Q9BYW3 111 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 UBQLN4Q9NRR5 601 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 LAMA4Q16363 1823 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 F13BP05160 661 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 KLK3P07288 261 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 NQO2P16083 231 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 PLGLB1Q02325 96 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 GRASPQ7Z6J2 395 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 CPXM2Q8N436 756 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 OR1S2Q8NGQ3 325 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 VPS25Q9BRG1 176 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 SPATA6Q9NWH7 488 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 UBR2Q8IWV8 1755 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 MBLAC1A4D2B0 266 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 IFITM5A6NNB3 132 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 HPNP05981 417 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 IGFBP1P08833 259 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 C1SP09871 688 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 RRASP10301 218 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 SNCAP37840 140 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 EXOSC7Q15024 291 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 AFMIDQ63HM1 303 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 TMEM71Q6P5X7 295 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 ALKAL1Q6UXT8 129 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 LIPIQ6XZB0 460 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 TTC9BQ8N6N2 239 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 OR1J1Q8NGS3 322 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 LMX1AQ8TE12 382 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 OR1E3Q8WZA6 343 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 TMEM18Q96B42 140 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 KCMF1Q9P0J7 381 aa13.49□□□□□ -0.25
SMARCA4-214ENST00000589677 A0A087WUU8 490 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 TRAV1-2A0A0B4J238 106 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 ZNF724A8MTY0 619 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 NME2P1O60361 137 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 NPY4RP50391 375 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 CALHM3Q86XJ0 350 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 PTOV1Q86YD1 416 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 RBM45Q8IUH3 476 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 TMEM151BQ8IW70 566 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 BPIFCQ8NFQ6 507 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 SFT2D1Q8WV19 159 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 HINT3Q9NQE9 182 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 DLL4Q9NR61 685 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 C5AR1P21730 350 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 PMPCAQ10713 525 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 HLXQ14774 488 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 TMEM81Q6P7N7 255 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 FAM185AQ8N0U4 392 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 OR2L13Q8N349 312 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 GALNT16Q8N428 558 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 COMMD1Q8N668 190 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 ANKRD9Q96BM1 317 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 WDR89Q96FK6 387 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 CMC2Q9NRP2 79 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 VSX1Q9NZR4 365 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 KDM4EB2RXH2 506 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 GALP22466 123 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 CSF2RBP32927 897 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 RAB11AP62491 216 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 MFSD9Q8NBP5 474 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 PLEKHA2Q9HB19 425 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 RHOFQ9HBH0 211 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 A0A1B0GWA3 101 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 SLC5A10A0PJK1 596 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 LDB3O75112 727 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 SFTPDP35247 375 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 ARRB1P49407 418 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 SNRPEP62304 92 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 SPICQ8N5J4 248 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 KLHDC7BQ96G42 594 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 ZNF251Q9BRH9 671 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 TRAF4Q9BUZ4 470 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 CHRDQ9H2X0 955 aa13.48□□□□□ -0.25
SMARCA4-214ENST00000589677 RNF212BA8MTL3 300 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 CD37P11049 281 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 BLVRBP30043 206 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 THBS3P49746 956 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 OR10A3P58181 314 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 OR6S1Q8NH40 331 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 HINT2Q9BX68 163 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 CDCP1Q9H5V8 836 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 B3GALT5Q9Y2C3 310 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 FAM221BA6H8Z2 402 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 H7BYZ3 331 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 TMEM189-UBE2V1I3L0A0 370 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 ST8SIA3O43173 380 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 TIMP2P16035 220 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 RANP62826 216 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 REEP5Q00765 189 aa13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 ATPAF1Q5TC12 328 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-214ENST00000589677 RPUSD3Q6P087 351 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms