RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TMEM54Q969K7 222 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 MUCL1Q96DR8 90 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 SNX18Q96RF0 628 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 PKP2Q99959 881 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 C9orf16Q9BUW7 83 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 EMC6Q9BV81 110 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 IFT27Q9BW83 186 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 ULBP2Q9BZM5 246 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 SEMA6AQ9H2E6 1030 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 DCLRE1BQ9H816 532 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 NGBQ9NPG2 151 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 OBP2BQ9NPH6 170 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 PAPOLBQ9NRJ5 636 aaKnown RBP8□□□□□ -1.13
CIRBP-218ENST00000588344 PRSS50Q9UI38 385 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 OAZ3Q9UMX2 235 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 ORC6Q9Y5N6 252 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 IER3IP1Q9Y5U9 82 aa8□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF99A8MXY4 864 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 H0YHG0 523 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 H3BN98 237 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 CASKO14936 926 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ARHGEF9O43307 516 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 UPK3AO75631 287 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 TRMUO75648 421 aaKnown RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 CLDN1O95832 211 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 IFNGP01579 166 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 RNF224P0DH78 156 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF26P17031 533 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 IGFBP2P18065 325 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 CDH2P19022 906 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 PRKACGP22612 351 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 IGHV1-2P23083 117 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 CRABP1P29762 137 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 KIR2DL3P43628 341 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 GIPRP48546 466 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 DAPP51397 102 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF84P51523 738 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF133P52736 654 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ERVK-25P63136 954 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ROR2Q01974 943 aaKnown RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 SLC27A4Q6P1M0 643 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ANKRD16Q6P6B7 361 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 KLHL17Q6TDP4 642 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 THSD4Q6ZMP0 1018 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF627Q7L945 461 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 BHLHA15Q7RTS1 189 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 FAM122BQ7Z309 247 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 DPPA2Q7Z7J5 298 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 CXorf67Q86X51 503 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 LNX2Q8N448 690 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF433Q8N7K0 673 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ACBD4Q8NC06 268 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF519Q8TB69 540 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 TEX47Q8TBZ9 253 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 SAMD8Q96LT4 415 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF570Q96NI8 536 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ERMAPQ96PL5 475 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 KCNK17Q96T54 332 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 NIPSNAP1Q9BPW8 284 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 WACQ9BTA9 647 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 TSSK6Q9BXA6 273 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 PRRG3Q9BZD7 231 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 CRLF2Q9HC73 371 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 GPR35Q9HC97 309 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 NPDC1Q9NQX5 325 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 KRT84Q9NSB2 600 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 TBC1D23Q9NUY8 699 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 ZNF226Q9NYT6 803 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 KCNN3Q9UGI6 736 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 MAGED1Q9Y5V3 778 aaPredicted RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 FLNCQ14315 2725 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 FREM3P0C091 2139 aa7.99□□□□□ -1.13
CIRBP-218ENST00000588344 HELZ2Q9BYK8 2649 aaKnown RBP7.99□□□□□ -1.13
CIRBP-218ENST00000588344 MED12Q93074 2177 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 PRSS37A4D1T9 235 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 OR5H1A6NKK0 313 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 ANKRD65E5RJM6 399 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 M0R3G1 203 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 DHHO43323 396 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 FARS2O95363 451 aaKnown RBP7.98□□□□□ -1.13
CIRBP-218ENST00000588344 RENP00797 406 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 IGHV3-9P01782 118 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 QDPRP09417 244 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 EPXP11678 715 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 COX6B1P14854 86 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 ANPEPP15144 967 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 NPR2P20594 1047 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 HOXC12P31275 282 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 RAD23AP54725 363 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 FXYD6P3P58550 94 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 UBE2NP61088 152 aaKnown RBP7.98□□□□□ -1.13
CIRBP-218ENST00000588344 ELF3P78545 371 aaPredicted RBP7.98□□□□□ -1.13
CIRBP-218ENST00000588344 MYBPC1Q00872 1141 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 CD47Q08722 323 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 TOP3AQ13472 1001 aaPredicted RBP7.98□□□□□ -1.13
CIRBP-218ENST00000588344 KRR1Q13601 381 aaKnown RBP7.98□□□□□ -1.13
CIRBP-218ENST00000588344 MELKQ14680 651 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 GABRA6Q16445 453 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 C10orf128Q5T292 105 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 CARD17Q5XLA6 110 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms