RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 ATG4DQ86TL0 474 aaPredicted RBP5.21□□□□□ -1.58
SDF2-206ENST00000587788 SLC35F2Q8IXU6 374 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 RDH10Q8IZV5 341 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 Q8N402 240 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 SCAIQ8N9R8 606 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 DUSP18Q8NEJ0 188 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 C17orf47Q8NEP4 570 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 OR52E2Q8NGJ4 325 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 OR4C3Q8NH37 302 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 STT3BQ8TCJ2 826 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 PTPMT1Q8WUK0 201 aaPredicted RBP5.21□□□□□ -1.58
SDF2-206ENST00000587788 HIST1H2ACQ93077 130 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 C3orf49Q96BT1 292 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 RNF31Q96EP0 1072 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 LIN37Q96GY3 246 aaPredicted RBP5.21□□□□□ -1.58
SDF2-206ENST00000587788 SNX18Q96RF0 628 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 CTRCQ99895 268 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 DDA1Q9BW61 102 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 NMNAT2Q9BZQ4 307 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 ENKD1Q9H0I2 346 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 ZCCHC4Q9H5U6 513 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 WDR54Q9H977 334 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 ISG20L2Q9H9L3 353 aaKnown RBP5.21□□□□□ -1.58
SDF2-206ENST00000587788 TIGARQ9NQ88 270 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 CYSLTR2Q9NS75 346 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 LANCL2Q9NS86 450 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 C14orf119Q9NWQ9 140 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 OCIAD1Q9NX40 245 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 ABRACLQ9P1F3 81 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 COMMD3Q9UBI1 195 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 DKK4Q9UBT3 224 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 COPS7AQ9UBW8 275 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 TEKT2Q9UIF3 430 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 PADI1Q9ULC6 663 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 YARS2Q9Y2Z4 477 aaKnown RBP5.21□□□□□ -1.58
SDF2-206ENST00000587788 CLDN16Q9Y5I7 305 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 IER3IP1Q9Y5U9 82 aa5.21□□□□□ -1.58
SDF2-206ENST00000587788 CHD8Q9HCK8 2581 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 IGF2RP11717 2491 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 SPTBP11277 2137 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 NUP210LQ5VU65 1888 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CCDC187A0A096LP49 1063 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 TCRBV16S1A1N1A0A5B0 115 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 TMEM82A0PJX8 343 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 TMEM8BA6NDV4 472 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CD8B2A6NJW9 211 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 NOTOA8MTQ0 251 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CDRT15L2A8MXV6 281 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 FAM25AB3EWG3 89 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 FAM25CB3EWG5 89 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 FAM25GB3EWG6 89 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 PHYHO14832 338 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 LRRTM2O43300 516 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CDC40O60508 579 aaKnown RBP eCLIP5.2□□□□□ -1.58
SDF2-206ENST00000587788 HPGDSO60760 199 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 ITGA10O75578 1167 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 REM1O75628 298 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 SC5DO75845 299 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CCNKO75909 580 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 ZNF432O94892 652 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 TNFSF15O95150 251 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 MT-ATP6P00846 226 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CLPSP04118 112 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 IGKV3-11P04433 115 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CD14P08571 375 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 RAB40ALP0C0E4 278 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 JMJD7P0C870 316 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CD8BP10966 210 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 ICAM2P13598 275 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 SPNP16150 400 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 HIST1H1CP16403 213 aaKnown RBP5.2□□□□□ -1.58
SDF2-206ENST00000587788 PGCP20142 388 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 RAB3BP20337 219 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 NPR2P20594 1047 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 MAPK3P27361 379 aaPredicted RBP5.2□□□□□ -1.58
SDF2-206ENST00000587788 APEX1P27695 318 aaKnown RBP5.2□□□□□ -1.58
SDF2-206ENST00000587788 ITPKBP27987 946 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 HLA-DMAP28067 261 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 IL12BP29460 328 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 PYCR1P32322 319 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 DDOSTP39656 456 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 CD79BP40259 229 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 HTR3AP46098 478 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 RFX2P48378 723 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 PITPNBP48739 271 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 PNLIPRP2P54317 469 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 EMP2P54851 167 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 TPTEP56180 551 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 RAB25P57735 213 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 MAT1AQ00266 395 aaKnown RBP5.2□□□□□ -1.58
SDF2-206ENST00000587788 SKP2Q13309 424 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 IL18Q14116 193 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 ERV3-1Q14264 604 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 ZNF74Q16587 644 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 ACSM3Q53FZ2 586 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 HSD17B12Q53GQ0 312 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 ARHGAP40Q5TG30 622 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 BICRALQ6AI39 1079 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 VASNQ6EMK4 673 aa5.2□□□□□ -1.58
SDF2-206ENST00000587788 FAAH2Q6GMR7 532 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms