RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 H3BML4 177 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 XPNPEP2O43895 674 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 OPN1LWP04000 364 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 IGFBP1P08833 259 aaPredicted RBP11.28□□□□□ -0.6
VMP1-202ENST00000585847 CPN1P15169 458 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 ATP6V1B1P15313 513 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 CCNA2P20248 432 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 POU3F2P20265 443 aaPredicted RBP11.28□□□□□ -0.6
VMP1-202ENST00000585847 GNLYP22749 145 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 CRABP1P29762 137 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 PTGS2P35354 604 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 UQCRFS1P47985 274 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 RPS3AP61247 264 aaKnown RBP11.28□□□□□ -0.6
VMP1-202ENST00000585847 HSF2Q03933 536 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 LTBQ06643 244 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.28□□□□□ -0.6
VMP1-202ENST00000585847 ST3GAL4Q11206 333 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 OR7A5Q15622 319 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 GXYLT1Q4G148 440 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 UBE2UQ5VVX9 321 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 HIST2H2BCQ6DN03 193 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 GPR141Q7Z602 305 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 UEVLDQ8IX04 471 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 MEIOBQ8N635 442 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 LRRC17Q8N6Y2 441 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 SLC37A3Q8NCC5 494 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 PROKR2Q8NFJ6 384 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 FAM57AQ8TBR7 257 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 SSC4DQ8WTU2 575 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 GGHQ92820 318 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 SLC25A36Q96CQ1 311 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 OR5B2Q96R09 309 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 NMNAT2Q9BZQ4 307 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 OR11A1Q9GZK7 315 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 HINT3Q9NQE9 182 aaKnown RBP11.28□□□□□ -0.6
VMP1-202ENST00000585847 TAS2R5Q9NYW4 299 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 VSX1Q9NZR4 365 aaPredicted RBP11.28□□□□□ -0.6
VMP1-202ENST00000585847 EXOGQ9Y2C4 368 aaKnown RBP11.28□□□□□ -0.6
VMP1-202ENST00000585847 IER3IP1Q9Y5U9 82 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 FKBP7Q9Y680 259 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 NOTCH2Q04721 2471 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 A0A0J9YW62 118 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 TEX13CA0A0J9YWL9 993 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 A6NHS1 94 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 PHYHO14832 338 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 NOL3O60936 208 aaKnown RBP11.27□□□□□ -0.61
VMP1-202ENST00000585847 IGHA1P01876 353 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 IMPDH2P12268 514 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 DIO1P49895 249 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 H3F3AP84243 136 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 MRPL28Q13084 256 aaKnown RBP11.27□□□□□ -0.61
VMP1-202ENST00000585847 CRMP1Q14194 572 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 TMEM176BQ3YBM2 270 aaPredicted RBP11.27□□□□□ -0.61
VMP1-202ENST00000585847 TIMM50Q3ZCQ8 353 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 SYT6Q5T7P8 510 aaPredicted RBP11.27□□□□□ -0.61
VMP1-202ENST00000585847 C1QL3Q5VWW1 255 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 RTL6Q6ICC9 239 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 PLBD1Q6P4A8 553 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 PLXDC2Q6UX71 529 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 KCTD8Q6ZWB6 473 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 ADGRE4PQ86SQ3 457 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 DOLPP1Q86YN1 238 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 CPOQ8IVL8 374 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 ALDH16A1Q8IZ83 802 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 RPRMLQ8N4K4 120 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 GALNT11Q8NCW6 608 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 OR52E2Q8NGJ4 325 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 OR5M9Q8NGP3 310 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 OR2V1Q8NHB1 315 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 ZNF519Q8TB69 540 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 RELTQ969Z4 430 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 INTS12Q96CB8 462 aaKnown RBP11.27□□□□□ -0.61
VMP1-202ENST00000585847 ARL5BQ96KC2 179 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 OXGR1Q96P68 337 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 CCDC90BQ9GZT6 254 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 EXO5Q9H790 373 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 TMEM185BQ9H7F4 350 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 ISYNA1Q9NPH2 558 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 DNAJC27Q9NZQ0 273 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 RCE1Q9Y256 329 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 TMEM14AQ9Y6G1 99 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 MED12LQ86YW9 2145 aa11.27□□□□□ -0.61
VMP1-202ENST00000585847 DOCK7Q96N67 2140 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 ARPC4-TTLL3A0A0A6YYG9 625 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 PRSS37A4D1T9 235 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 OR6C65A6NJZ3 312 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 HSPB2A8KAH6 182 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 MYL12BO14950 172 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 SLC19A2O60779 497 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 SMNDC1O75940 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
VMP1-202ENST00000585847 BCL10O95999 233 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 STSP08842 583 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 FCGR2AP12318 317 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 HIST1H1CP16403 213 aaKnown RBP11.26□□□□□ -0.61
VMP1-202ENST00000585847 SLC2A5P22732 501 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 ATP6V1E1P36543 226 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 OR2B6P58173 313 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 ACTA2P62736 377 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 ACTG2P63267 376 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms