RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ADRA2AP08913 450 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 CCL3P10147 92 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 ZNF823P16415 610 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 PYCR1P32322 319 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 SFTPDP35247 375 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 PTGDSP41222 190 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 GUCA1AP43080 201 aaPredicted RBP8.36□□□□□ -1.07
SS18-220ENST00000582092 ZP4Q12836 540 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 MRPL28Q13084 256 aaKnown RBP8.36□□□□□ -1.07
SS18-220ENST00000582092 AIMP2Q13155 320 aaKnown RBP8.36□□□□□ -1.07
SS18-220ENST00000582092 ATP1A4Q13733 1029 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 GGTLC2Q14390 218 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 INAQ16352 499 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 ACKR1Q16570 336 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 ZNF829Q3KNS6 432 aaPredicted RBP8.36□□□□□ -1.07
SS18-220ENST00000582092 GLYR1Q49A26 553 aaPredicted RBP8.36□□□□□ -1.07
SS18-220ENST00000582092 PDSS1Q5T2R2 415 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 ARL9Q6T311 187 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 MS4A15Q8N5U1 240 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 ZFP41Q8N8Y5 198 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 EXD3Q8N9H8 876 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 LRRC75AQ8NAA5 344 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 HAVCR2Q8TDQ0 301 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 THEM6Q8WUY1 208 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 RNF138Q8WVD3 245 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 TMEM41AQ96HV5 264 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 SNX18Q96RF0 628 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 INTS14Q96SY0 518 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 PIGQQ9BRB3 760 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 UTP23Q9BRU9 249 aaKnown RBP8.36□□□□□ -1.07
SS18-220ENST00000582092 SNTG1Q9NSN8 517 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 GALNT8Q9NY28 637 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 HDGFL3Q9Y3E1 203 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 KCNMB2Q9Y691 235 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 A3GALT2U3KPV4 340 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 MED13Q9UHV7 2174 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 MGAQ8IWI9 3026 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 ITPR1Q14643 2758 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 SPTA1P02549 2419 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 NBEAQ8NFP9 2946 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 TRDV1A0A1B0GX56 115 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 PRSS37A4D1T9 235 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 LIPT2A6NK58 231 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 G3V3Y1 287 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 H7C1C5 153 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 TERTO14746 1132 aaKnown RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 CASKO14936 926 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 RGS5O15539 181 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 SELENOFO60613 162 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 SLC16A7O60669 478 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 EIF1BO60739 113 aaKnown RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 AKR7A3O95154 331 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 CDRT1O95170 752 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 IL1AP01583 271 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 NR2C1P13056 603 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 CD53P19397 219 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 CNR1P21554 472 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 MYL9P24844 172 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 EDNRAP25101 427 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 CRYBB2P43320 205 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 ENTPD1P49961 510 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 DLX5P56178 289 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 CLRN1P58418 232 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 LCN6P62502 163 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 RPS25P62851 125 aaKnown RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 CSNK2A1P68400 391 aaPredicted RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 HSF1Q00613 529 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 POU3F1Q03052 451 aaPredicted RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 SLC3A1Q07837 685 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 MYBPHQ13203 477 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 TP53I3Q53FA7 332 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 B3GNTL1Q67FW5 361 aaPredicted RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 TIGD3Q6B0B8 471 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 C22orf42Q6IC83 251 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 MZT2AQ6P582 158 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 SLC35D2Q76EJ3 337 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 VASH1Q7L8A9 365 aaPredicted RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 FAM122BQ7Z309 247 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 PXKQ7Z7A4 578 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 ZBTB46Q86UZ6 589 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 ATCAYQ86WG3 371 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 PM20D2Q8IYS1 436 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 SYS1Q8N2H4 156 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 YIPF7Q8N8F6 280 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 FADS6Q8N9I5 356 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 WDSUB1Q8N9V3 476 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 OR10H5Q8NGA6 315 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 OR5M1Q8NGP8 315 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 OR6N2Q8NGY6 317 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 OR14L1PQ8NHC6 308 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 AP3S1Q92572 193 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 KISS1RQ969F8 398 aaPredicted RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 ZNF524Q96C55 264 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 KLHDC3Q9BQ90 382 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 PTDSS2Q9BVG9 487 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 CDADC1Q9BWV3 514 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 NMNAT2Q9BZQ4 307 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 SYT4Q9H2B2 425 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 TPK1Q9H3S4 243 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms