RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 NISCHQ9Y2I1 1504 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 NKX2-6A6NCS4 301 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 LAD1O00515 517 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 PES1O00541 588 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 PPP1R2P9O14990 202 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 PNMA6AP0CW24 399 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 GDI1P31150 447 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 RORCP51449 518 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 CRISP3P54108 245 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 FGF8P55075 233 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 SGCAQ16586 387 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 GUCA2BQ16661 112 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 ZBED5Q49AG3 693 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 TMEM107Q6UX40 140 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 NIPA1Q7RTP0 329 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 C6orf120Q7Z4R8 191 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 PLPPR1Q8TBJ4 325 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 GEMIN6Q8WXD5 167 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 DNAJC19Q96DA6 116 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 ECSITQ9BQ95 431 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 DNTTIP1Q9H147 329 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 INPP5EQ9NRR6 644 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 GNPTGQ9UJJ9 305 aa3.04□□□□□ -1.92
SMCHD1-205ENST00000581383 MTCL1Q9Y4B5 1905 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 MAP3K15Q6ZN16 1313 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 HEATR9A2RTY3 570 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 GOLGA8OA6NCC3 632 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF716A6NP11 495 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 GOLGA8NF8WBI6 632 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 H3BNH8 94 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 AP3B1O00203 1094 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 PEX7O00628 323 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 DYNC1I1O14576 645 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 SOX15O60248 233 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 SUPT3HO75486 399 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 FGGP02679 453 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF735P0CB33 412 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 SUCLG1P53597 346 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 UGT2B15P54855 530 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 RPS21P63220 83 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 MRPS22P82650 360 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 MECOMQ03112 1051 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 SMARCB1Q12824 385 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 PPP1R7Q15435 360 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 PIGGQ5H8A4 983 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF836Q6ZNA1 936 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 LINC00173Q6ZV60 143 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 HSD17B11Q8NBQ5 300 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 ASB9Q96DX5 294 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 KCTD14Q9BQ13 255 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 GABARAPL3Q9BY60 117 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 UGT1A7Q9HAW7 530 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 UGT1A10Q9HAW8 530 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 UGT1A8Q9HAW9 530 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 CTPS2Q9NRF8 586 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF226Q9NYT6 803 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 STOX2Q9P2F5 926 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF223Q9UK11 482 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 NUP50Q9UKX7 468 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 WSB1Q9Y6I7 421 aa3.03□□□□□ -1.92
SMCHD1-205ENST00000581383 IGHV3-64DA0A0J9YX35 117 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 A0A1B0GVI7 797 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNF726A6NNF4 738 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 CCDC169A6NNP5 214 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 XKRYO14609 159 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 EIF3GO75821 320 aaKnown RBP eCLIP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 CRYGBP07316 175 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 IGHV3-43DP0DP04 118 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 RPS2P15880 293 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 CDKN1BP46527 198 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 TFPI2P48307 235 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 GPX6P59796 221 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 RSPO1Q2MKA7 263 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 VPS26BQ4G0F5 336 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 COA6Q5JTJ3 125 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 TIFABQ6ZNK6 161 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 SPATA4Q8NEY3 305 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 B3GNT7Q8NFL0 401 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 TMEM54Q969K7 222 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 LRRC58Q96CX6 371 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 RASD2Q96D21 266 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 AURKBQ96GD4 344 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 FAM210BQ96KR6 192 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNF285Q96NJ3 590 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 ATP5SQ99766 215 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 CCDC77Q9BR77 488 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 SLC25A39Q9BZJ4 359 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 GPR61Q9BZJ8 451 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 CDC42EP4Q9H3Q1 356 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 DMAP1Q9NPF5 467 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 NMRK1Q9NWW6 199 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 STARD10Q9Y365 291 aa3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 F11RQ9Y624 299 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-205ENST00000581383 CEMIPQ8WUJ3 1361 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNFX1Q9P2E3 1918 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 CIB4A0PJX0 185 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms